RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PLAGL2Q9UPG8 496 aa25.95■■□□□ 1.74
SNF8-217ENST00000576353 CNTNAP2Q9UHC6 1331 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 A0A1B0GUA9 196 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 GRM6O15303 877 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 B4GALT5O43286 388 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 NCLP19338 710 aaKnown RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 DMP1Q13316 513 aaPredicted RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 KARSQ15046 597 aaKnown RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 STK38Q15208 465 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 SKIV2LQ15477 1246 aaKnown RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 LONRF3Q496Y0 759 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 FOXD4L5Q5VV16 416 aaPredicted RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 LRRC55Q6ZSA7 311 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 KRI1Q8N9T8 703 aaKnown RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 FOXD4L4Q8WXT5 416 aaPredicted RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 TRIM6Q9C030 488 aaPredicted RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 UBN1Q9NPG3 1134 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 DAXXQ9UER7 740 aaPredicted RBP25.94■■□□□ 1.74
SNF8-217ENST00000576353 CCDC39Q9UFE4 941 aa25.94■■□□□ 1.74
SNF8-217ENST00000576353 CCDC169A6NNP5 214 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 F13A1P00488 732 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 PRKCBP05771 671 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 PLCG1P19174 1290 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 TXLNAP40222 546 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 PEX3P56589 373 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 PRPF4BQ13523 1007 aaKnown RBP25.93■■□□□ 1.74
SNF8-217ENST00000576353 TIGD5Q53EQ6 642 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 NOMO2Q5JPE7 1267 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 SLC27A1Q6PCB7 646 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 HACE1Q8IYU2 909 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 DAW1Q8N136 415 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 COLGALT1Q8NBJ5 622 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 EPSTI1Q96J88 318 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 EIF2AQ9BY44 585 aaKnown RBP25.93■■□□□ 1.74
SNF8-217ENST00000576353 CCDC113Q9H0I3 377 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 ALG13Q9NP73 1137 aaKnown RBP25.93■■□□□ 1.74
SNF8-217ENST00000576353 RBM19Q9Y4C8 960 aaKnown RBP25.93■■□□□ 1.74
SNF8-217ENST00000576353 TRANK1O15050 2925 aa25.93■■□□□ 1.74
SNF8-217ENST00000576353 PRRC2BQ5JSZ5 2229 aaKnown RBP25.92■■□□□ 1.74
SNF8-217ENST00000576353 ACKR2O00590 384 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 OFD1O75665 1012 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 ITGB1P05556 798 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 ITGA4P13612 1032 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 NPTX2P47972 431 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 MAPK7Q13164 816 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 TMEM132AQ24JP5 1023 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 SPECC1Q5M775 1068 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 AGMOQ6ZNB7 445 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 THNSL1Q8IYQ7 743 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 LINC00301Q8NCQ3 95 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 SMG8Q8ND04 991 aaKnown RBP25.92■■□□□ 1.74
SNF8-217ENST00000576353 SPPL3Q8TCT6 385 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 SYMPKQ92797 1274 aaKnown RBP25.92■■□□□ 1.74
SNF8-217ENST00000576353 ZNF558Q96NG5 402 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 CLIC6Q96NY7 704 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 RSAD1Q9HA92 442 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 TFIP11Q9UBB9 837 aaKnown RBP25.92■■□□□ 1.74
SNF8-217ENST00000576353 HCSTQ9UBK5 93 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 IPPQ9Y573 584 aa25.92■■□□□ 1.74
SNF8-217ENST00000576353 RALGAPA2Q2PPJ7 1873 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 PHLPP2Q6ZVD8 1323 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 CARNS1A5YM72 827 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 MEIS3P2A8K0S8 358 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 K7ERI5 159 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 LIG1P18858 919 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 BECN1Q14457 450 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 ATL3Q6DD88 541 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 KCNT2Q6UVM3 1135 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 URGCPQ8TCY9 931 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 RAD54LQ92698 747 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 KIFC3Q9BVG8 833 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 KMT5AQ9NQR1 393 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 BLOC1S4Q9NUP1 217 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 KANSL3Q9P2N6 904 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 INPP5FQ9Y2H2 1132 aa25.91■■□□□ 1.74
SNF8-217ENST00000576353 COL4A4P53420 1690 aaPredicted RBP25.9■■□□□ 1.74
SNF8-217ENST00000576353 N4BP3O15049 544 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 SPTLC2O15270 562 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 FGF18O76093 207 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 YEATS4O95619 227 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 DDIT3P35638 169 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 PPM1AP35813 382 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 UBE3AQ05086 875 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 RAD51AP2Q09MP3 1159 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 USP49Q70CQ1 688 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 GPBP1Q86WP2 473 aa25.9■■□□□ 1.74
SNF8-217ENST00000576353 NTPCRQ9BSD7 190 aaKnown RBP25.9■■□□□ 1.74
SNF8-217ENST00000576353 SFI1A8K8P3 1242 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 PPP6R2O75170 966 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 NPTXRO95502 500 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 PLS3P13797 630 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 ALDH7A1P49419 539 aaKnown RBP25.89■■□□□ 1.74
SNF8-217ENST00000576353 SMTNP53814 917 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 RNASELQ05823 741 aaKnown RBP25.89■■□□□ 1.74
SNF8-217ENST00000576353 PKP1Q13835 747 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 DHX8Q14562 1220 aaKnown RBP25.89■■□□□ 1.74
SNF8-217ENST00000576353 ARSHQ5FYA8 562 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 CDR2LQ86X02 465 aaPredicted RBP25.89■■□□□ 1.74
SNF8-217ENST00000576353 POF1BQ8WVV4 589 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 SPIRE2Q8WWL2 714 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms