RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 CSDE1O75534 798 aaKnown RBP10.53□□□□□ -0.72
CCDC40-214ENST00000575431 DGKIO75912 1065 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 PRKCBP05771 671 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 ARF4P18085 180 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-214ENST00000575431 FGFR4P22455 802 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 DNAJB2P25686 324 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 ALCAMQ13740 583 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 AMHR2Q16671 573 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 KANK3Q6NY19 840 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 STXBP4Q6ZWJ1 553 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 DYMQ7RTS9 669 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 HAUS6Q7Z4H7 955 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 ECHDC2Q86YB7 292 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 FAM178BQ8IXR5 827 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 CRIPAKQ8N1N5 446 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 FSIP1Q8NA03 581 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 LINC01599Q8WXQ3 324 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 YME1L1Q96TA2 773 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 C7orf25Q9BPX7 421 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 ADPGKQ9BRR6 497 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 PBX4Q9BYU1 374 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 TRIM9Q9C026 710 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 CCDC113Q9H0I3 377 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 ST6GALNAC4Q9H4F1 302 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 ZHX3Q9H4I2 956 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 UBN1Q9NPG3 1134 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 FAM105AQ9NUU6 356 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 TTC3P53804 2025 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 CNTNAP2Q9UHC6 1331 aa10.53□□□□□ -0.72
CCDC40-214ENST00000575431 CEP290O15078 2479 aa10.52□□□□□ -0.72
CCDC40-214ENST00000575431 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 MYMKA6NI61 221 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 N4BP3O15049 544 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 SLC16A4O15374 487 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 UPP2O95045 317 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 IDEP14735 1019 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 HOXA11P31270 313 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 SLC27A1Q6PCB7 646 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 ZPBP2Q6X784 338 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 CLEC17AQ6ZS10 378 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 MRPL10Q7Z7H8 261 aaKnown RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 CMTR2Q8IYT2 770 aaKnown RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 TMEM87AQ8NBN3 555 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 TMEM161BQ8NDZ6 487 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 SP7Q8TDD2 431 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 TIFAQ96CG3 184 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 HVCN1Q96D96 273 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 DNAJC19Q96DA6 116 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 SAMD11Q96NU1 681 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 MRPL4Q9BYD3 311 aaKnown RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 TRIM6Q9C030 488 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-214ENST00000575431 POLD4Q9HCU8 107 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 PANK4Q9NVE7 773 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 TNFSF13BQ9Y275 285 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 RWDD3Q9Y3V2 267 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 PTPRSQ13332 1948 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 ADGRA3Q8IWK6 1321 aa10.52□□□□□ -0.73
CCDC40-214ENST00000575431 FRMD3A2A2Y4 597 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF202O95125 648 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 LIG1P18858 919 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 FXR1P51114 621 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 NDUFA8P51970 172 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 RABGGTBP53611 331 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 GTF2BQ00403 316 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 HERC4Q5GLZ8 1057 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF697Q5TEC3 545 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 FAM117BQ6P1L5 589 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 UNC13DQ70J99 1090 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF720Q7Z2F6 126 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 CCDC47Q96A33 483 aaKnown RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ZNF689Q96CS4 500 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 TIGD1Q96MW7 591 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 GBP4Q96PP9 640 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 KIFC3Q9BVG8 833 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 TMEM117Q9H0C3 514 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 MRPL44Q9H9J2 332 aaKnown RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
CCDC40-214ENST00000575431 EXOC7Q9UPT5 735 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 PCDHB2Q9Y5E7 798 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 PCDHB13Q9Y5F0 798 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
CCDC40-214ENST00000575431 K7ENM7 598 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-214ENST00000575431 B4GALT5O43286 388 aa10.5□□□□□ -0.73
CCDC40-214ENST00000575431 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-214ENST00000575431 TOM1L1O75674 476 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms