RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 PLA2G4FQ68DD2 849 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 MYADMQ96S97 322 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 WDR6Q9NNW5 1121 aaKnown RBP19.68■□□□□ 0.74
CCDC40-211ENST00000574099 AGPAT5Q9NUQ2 364 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 DOCK8Q8NF50 2099 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 EP300Q09472 2414 aaPredicted RBP19.67■□□□□ 0.74
CCDC40-211ENST00000574099 CCDC196A0A1B0GTZ2 297 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 DDX11L8A8MPP1 907 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 STBD1O95210 358 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 ALDH2P05091 517 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 RCAN1P53805 252 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 NONOQ15233 471 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCDC40-211ENST00000574099 TAS1R1Q7RTX1 841 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 SLC44A3Q8N4M1 653 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 ST13P5Q8NFI4 369 aaPredicted RBP19.67■□□□□ 0.74
CCDC40-211ENST00000574099 CMASQ8NFW8 434 aaPredicted RBP19.67■□□□□ 0.74
CCDC40-211ENST00000574099 BICD2Q8TD16 824 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 GPR152Q8TDT2 470 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 STAMQ92783 540 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 TMEM175Q9BSA9 504 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 HERC2P3Q9BVR0 1158 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 MARCH5Q9NX47 278 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 VPS54Q9P1Q0 977 aa19.67■□□□□ 0.74
CCDC40-211ENST00000574099 TEX28O15482 410 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 PRPF3O43395 683 aaKnown RBP19.66■□□□□ 0.74
CCDC40-211ENST00000574099 PSMD10O75832 226 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 GLUD1P00367 558 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 SOD2P04179 222 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 ADH1AP07327 375 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 SPATA31D3P0C874 917 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 SRFP11831 508 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 IRX6P78412 446 aaPredicted RBP19.66■□□□□ 0.74
CCDC40-211ENST00000574099 SPATA31D4Q6ZUB0 917 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 CCDC148Q8NFR7 591 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 SMG7Q92540 1137 aaKnown RBP19.66■□□□□ 0.74
CCDC40-211ENST00000574099 RPS6KC1Q96S38 1066 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 SEMA4AQ9H3S1 761 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 IFT122Q9HBG6 1241 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 STK39Q9UEW8 545 aa19.66■□□□□ 0.74
CCDC40-211ENST00000574099 FRYLO94915 3013 aa19.65■□□□□ 0.74
CCDC40-211ENST00000574099 MAFO75444 373 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-211ENST00000574099 TDP2O95551 362 aa19.65■□□□□ 0.74
CCDC40-211ENST00000574099 OR1G1P47890 313 aa19.65■□□□□ 0.74
CCDC40-211ENST00000574099 AKAP17AQ02040 695 aaKnown RBP19.65■□□□□ 0.74
CCDC40-211ENST00000574099 GET4Q7L5D6 327 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-211ENST00000574099 RDM1Q8NG50 284 aa19.65■□□□□ 0.74
CCDC40-211ENST00000574099 BMP2KQ9NSY1 1161 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-211ENST00000574099 EPS15L1Q9UBC2 864 aa19.65■□□□□ 0.74
CCDC40-211ENST00000574099 FANCMQ8IYD8 2048 aa19.64■□□□□ 0.74
CCDC40-211ENST00000574099 DNAH14Q0VDD8 3507 aa19.64■□□□□ 0.74
CCDC40-211ENST00000574099 F8W810 466 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 GLUD2P49448 558 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 USP11P51784 963 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 UBXN11Q5T124 520 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 ELMSAN1Q6PJG2 1045 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 Q6ZUG5 572 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 ANO5Q75V66 913 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 DCLK2Q8N568 766 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 TBCKQ8TEA7 893 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 BRF1Q92994 677 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 SLC26A6Q9BXS9 759 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 MINDY3Q9H8M7 445 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 PIDD1Q9HB75 910 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 ARHGEF3Q9NR81 526 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 KANSL3Q9P2N6 904 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 COL4A3BPQ9Y5P4 624 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 CNTNAP2Q9UHC6 1331 aa19.64■□□□□ 0.73
CCDC40-211ENST00000574099 TDRD15B5MCY1 1934 aaKnown RBP19.64■□□□□ 0.73
CCDC40-211ENST00000574099 COL4A3Q01955 1670 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 SP9P0CG40 484 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 KRT32Q14532 448 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 ZC3H14Q6PJT7 736 aaKnown RBP19.63■□□□□ 0.73
CCDC40-211ENST00000574099 MRPL10Q7Z7H8 261 aaKnown RBP19.63■□□□□ 0.73
CCDC40-211ENST00000574099 PALB2Q86YC2 1186 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 GLYCTKQ8IVS8 523 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 ZNF707Q96C28 371 aaPredicted RBP19.63■□□□□ 0.73
CCDC40-211ENST00000574099 FOXQ1Q9C009 403 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 SIT1Q9Y3P8 196 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 MIA3Q5JRA6 1907 aa19.63■□□□□ 0.73
CCDC40-211ENST00000574099 MTCL1Q9Y4B5 1905 aaKnown RBP19.63■□□□□ 0.73
CCDC40-211ENST00000574099 POTEMA6NI47 508 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 SRGAP2CP0DJJ0 459 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 NPEPPSP55786 919 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 NLRP5P59047 1200 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 TSGA10IPQ3SY00 556 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 Q4G0T1 1027 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 POTEGQ6S5H5 508 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 B3GNT9Q6UX72 402 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 COLGALT2Q8IYK4 626 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 TMEM143Q96AN5 459 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 B3GALT6Q96L58 329 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 DLGAP2Q9P1A6 1054 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 DPP7Q9UHL4 492 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 SSX2IPQ9Y2D8 614 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 MYH15Q9Y2K3 1946 aa19.62■□□□□ 0.73
CCDC40-211ENST00000574099 NID2Q14112 1375 aa19.61■□□□□ 0.73
CCDC40-211ENST00000574099 LRRN2O75325 713 aa19.61■□□□□ 0.73
CCDC40-211ENST00000574099 ITGA4P13612 1032 aa19.61■□□□□ 0.73
CCDC40-211ENST00000574099 HOXA11P31270 313 aaPredicted RBP19.61■□□□□ 0.73
CCDC40-211ENST00000574099 MLH1P40692 756 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms