RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 FAM187BQ17R55 369 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 HERC4Q5GLZ8 1057 aaPredicted RBP20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 NPAS4Q8IUM7 802 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 HERC6Q8IVU3 1022 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 HACE1Q8IYU2 909 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 CCDC47Q96A33 483 aaKnown RBP20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 ADPGKQ9BRR6 497 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 TRIM9Q9C026 710 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 TRIM6Q9C030 488 aaPredicted RBP20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 ARHGAP28Q9P2N2 729 aa20.8■□□□□ 0.92
RPH3AL-209ENST00000572965 ACTN4O43707 911 aaKnown RBP20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 TLL1O43897 1013 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 MGEA5O60502 916 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 UBE2HP62256 183 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 SMAD3P84022 425 aaKnown RBP20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 DSC3Q14574 896 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 LONRF3Q496Y0 759 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 FAM117BQ6P1L5 589 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 STXBP4Q6ZWJ1 553 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 TOP1MTQ969P6 601 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 DNAJC19Q96DA6 116 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 C7orf25Q9BPX7 421 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 MRPL4Q9BYD3 311 aaKnown RBP20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 FZD8Q9H461 694 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 GOLPH3LQ9H4A5 285 aa20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 MRPL44Q9H9J2 332 aaKnown RBP20.79■□□□□ 0.92
RPH3AL-209ENST00000572965 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 CNTNAP2Q9UHC6 1331 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 N4BP3O15049 544 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 KINO60870 393 aaKnown RBP20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 MAPTP10636 758 aaKnown RBP20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 NCKAP1LP55160 1127 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 HABP4Q5JVS0 413 aaKnown RBP20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 KRBA2Q6ZNG9 492 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 HAUS6Q7Z4H7 955 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 SFR1Q86XK3 245 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 LINC01599Q8WXQ3 324 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 PGBD4Q96DM1 585 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 BICD1Q96G01 975 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 PAGE5Q96GU1 130 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 YME1L1Q96TA2 773 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 CCDC113Q9H0I3 377 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 TRIOBPQ9H2D6 2365 aa20.78■□□□□ 0.92
RPH3AL-209ENST00000572965 A0A0U1RQF3 1178 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 C9IYK1 514 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 HOXA2O43364 376 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 GJB5O95377 273 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 ARF4P18085 180 aaPredicted RBP20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 ALCAMQ13740 583 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 CNNM4Q6P4Q7 775 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 CLEC17AQ6ZS10 378 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 RTN4RL1Q86UN2 441 aaPredicted RBP20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 ABI1Q8IZP0 508 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 RNF169Q8NCN4 708 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 TMEM161BQ8NDZ6 487 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 CPB2Q96IY4 423 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 RAD9AQ99638 391 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 TRAIPQ9BWF2 469 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 ELAC1Q9H777 363 aaKnown RBP20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 FAM105AQ9NUU6 356 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 TMEM161AQ9NX61 479 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 INSL6Q9Y581 213 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 PCDHA11Q9Y5I1 949 aa20.77■□□□□ 0.92
RPH3AL-209ENST00000572965 GTPBP6O43824 516 aaPredicted RBP20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 GCNT3O95395 438 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 EOMESO95936 686 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 AMHR2Q16671 573 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 SLC27A1Q6PCB7 646 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 UNC13DQ70J99 1090 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 ECHDC2Q86YB7 292 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 FMR1NBQ8N0W7 255 aaPredicted RBP20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 BLZF1Q9H2G9 400 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 OLFML3Q9NRN5 406 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 PCDHB13Q9Y5F0 798 aa20.76■□□□□ 0.91
RPH3AL-209ENST00000572965 PVALEFA0A1B0GWK0 134 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 GRXCR1A8MXD5 290 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 B4GALT5O43286 388 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 HOXA11P31270 313 aaPredicted RBP20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 FAM189BP81408 668 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 COASYQ13057 564 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 ATF7IP2Q5U623 682 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 HVCN1Q96D96 273 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 TCHPQ9BT92 498 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 EXOC1Q9NV70 894 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 TBC1D7Q9P0N9 293 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 EXOC7Q9UPT5 735 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 PCDHB2Q9Y5E7 798 aa20.75■□□□□ 0.91
RPH3AL-209ENST00000572965 A0A1B0GUA9 196 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 FRMD3A2A2Y4 597 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 NMT1P30419 496 aaKnown RBP20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 MATR3P43243 847 aaKnown RBP eCLIP20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 LIG4P49917 911 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 RABGGTBP53611 331 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 TTC3P53804 2025 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 CUL4BQ13620 913 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 DCAF4L1Q3SXM0 396 aa20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 FAM109BQ6ICB4 259 aaPredicted RBP20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 TMCO2Q7Z6W1 182 aaPredicted RBP20.74■□□□□ 0.91
RPH3AL-209ENST00000572965 GRAMD1CQ8IYS0 662 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms