RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 GRIA4P48058 902 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 HSD17B4P51659 736 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 GYS2P54840 703 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 NUCB1Q02818 461 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 GRM4Q14833 912 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 TRIM71Q2Q1W2 868 aaKnown RBP7.2□□□□□ -1.26
PRPF8-204ENST00000572445 TCEAL5Q5H9L2 206 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 TMEM31Q5JXX7 168 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 USP17L6PQ6QN14 398 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 BNC2Q6ZN30 1099 aaPredicted RBP7.2□□□□□ -1.26
PRPF8-204ENST00000572445 RUFY4Q6ZNE9 571 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 STOX1Q6ZVD7 989 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 TRMT1LQ7Z2T5 733 aaKnown RBP7.2□□□□□ -1.26
PRPF8-204ENST00000572445 SKAP1Q86WV1 359 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 CCNJLQ8IV13 435 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 PHOSPHO2Q8TCD6 241 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 PGBD1Q96JS3 809 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 HHIPQ96QV1 700 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 IWS1Q96ST2 819 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 LRFN3Q9BTN0 628 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 DSCC1Q9BVC3 393 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 C1QTNF1Q9BXJ1 281 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 IGFLR1Q9H665 355 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 CNNM2Q9H8M5 875 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 BRD7Q9NPI1 651 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 TMEM260Q9NX78 707 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 PPP4R2Q9NY27 417 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 CLDND1Q9NY35 253 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 CTNNA3Q9UI47 895 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 PNMA2Q9UL42 364 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 NAP1L2Q9ULW6 460 aaPredicted RBP7.2□□□□□ -1.26
PRPF8-204ENST00000572445 G3BP2Q9UN86 482 aaKnown RBP7.2□□□□□ -1.26
PRPF8-204ENST00000572445 MAPK8IP1Q9UQF2 711 aa7.2□□□□□ -1.26
PRPF8-204ENST00000572445 MYH9P35579 1960 aaKnown RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 LOC102724159A0A0B4J2E5 919 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 ABHD14A-ACY1A0A1B0GW23 586 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 DDX39AO00148 427 aaKnown RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 HIP1O00291 1037 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 CYTH3O43739 400 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 F13A1P00488 732 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 CXCL10P02778 98 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 PCP11498 1178 aaKnown RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 SP100P23497 879 aaPredicted RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 TARSP26639 723 aaKnown RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 GATMP50440 423 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 GPM6BQ13491 265 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 PWP2Q15269 919 aaKnown RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 SEC23AQ15436 765 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 EPC2Q52LR7 807 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 CCDC178Q5BJE1 867 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 AGMOQ6ZNB7 445 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 CATIPQ7Z7H3 387 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 SMC5Q8IY18 1101 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 RNF217Q8TC41 542 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 LMBR1Q8WVP7 490 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 TRAPPC12Q8WVT3 735 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 SEPT8Q92599 483 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 RAD9AQ99638 391 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 TNKS2Q9H2K2 1166 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 DZANK1Q9NVP4 752 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 SEC63Q9UGP8 760 aaKnown RBP7.19□□□□□ -1.26
PRPF8-204ENST00000572445 COG5Q9UP83 839 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 GINS2Q9Y248 185 aa7.19□□□□□ -1.26
PRPF8-204ENST00000572445 E7EWF7 191 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 HAS3O00219 553 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 PDPK1O15530 556 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 CYP21A2P08686 494 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 GIPRP48546 466 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 ANTXR2P58335 489 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 ERVK-21P61565 698 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 PPFIA1Q13136 1202 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
PRPF8-204ENST00000572445 SPRED3Q2MJR0 410 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 GNPTABQ3T906 1256 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 HEATR3Q7Z4Q2 680 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 RPAINQ86UA6 219 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 SERINC5Q86VE9 423 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 SESTD1Q86VW0 696 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 MICU3Q86XE3 530 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 OR13H1Q8NG92 308 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 CTCFLQ8NI51 663 aaPredicted RBP7.18□□□□□ -1.26
PRPF8-204ENST00000572445 SNIP1Q8TAD8 396 aaKnown RBP7.18□□□□□ -1.26
PRPF8-204ENST00000572445 GLG1Q92896 1179 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 CUL5Q93034 780 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 TCEANC2Q96MN5 208 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 C16orf70Q9BSU1 422 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 SLKQ9H2G2 1235 aaPredicted RBP7.18□□□□□ -1.26
PRPF8-204ENST00000572445 RNPEPQ9H4A4 650 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 GPAMQ9HCL2 828 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 ACTR10Q9NZ32 417 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 ZFATQ9P243 1243 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 ZNF215Q9UL58 517 aaPredicted RBP7.18□□□□□ -1.26
PRPF8-204ENST00000572445 PCDHB5Q9Y5E4 795 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 PCDHGC5Q9Y5F6 944 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 EMSYQ7Z589 1322 aa7.18□□□□□ -1.26
PRPF8-204ENST00000572445 TRANK1O15050 2925 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms