RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ADGRD2Q7Z7M1 963 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 SMG8Q8ND04 991 aaKnown RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 ADAMTS19Q8TE59 1207 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 ZNF558Q96NG5 402 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 NECAB3Q96P71 396 aaPredicted RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 PLIN2Q99541 437 aa16.11■□□□□ 0.17
LITAF-208ENST00000571627 MRPL9Q9BYD2 267 aaKnown RBP16.11■□□□□ 0.17
LITAF-208ENST00000571627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.1■□□□□ 0.17
LITAF-208ENST00000571627 B4GALT3O60512 393 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.17
LITAF-208ENST00000571627 OFD1O75665 1012 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 EYA4O95677 639 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 AXLP30530 894 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 RESTQ13127 1097 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 PCBP1Q15365 356 aaKnown RBP eCLIP16.1■□□□□ 0.17
LITAF-208ENST00000571627 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
LITAF-208ENST00000571627 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 NOMO2Q5JPE7 1267 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 ARL6IP4Q66PJ3 421 aaKnown RBP16.1■□□□□ 0.17
LITAF-208ENST00000571627 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 MRPL10Q7Z7H8 261 aaKnown RBP16.1■□□□□ 0.17
LITAF-208ENST00000571627 SYMPKQ92797 1274 aaKnown RBP16.1■□□□□ 0.17
LITAF-208ENST00000571627 PGBD4Q96DM1 585 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 PNMA5Q96PV4 448 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 KIFC3Q9BVG8 833 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 RUSC1Q9BVN2 902 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 GBP3Q9H0R5 595 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
LITAF-208ENST00000571627 IGFLR1Q9H665 355 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 TBC1D13Q9NVG8 400 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 CLDND1Q9NY35 253 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 DNM3Q9UQ16 869 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 USP20Q9Y2K6 914 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 HES2Q9Y543 173 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 IPPQ9Y573 584 aa16.1■□□□□ 0.17
LITAF-208ENST00000571627 TTLL13PA6NNM8 815 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 NT5C1B-RDH14C9J2C7 533 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 H3BQ06 376 aaPredicted RBP16.09■□□□□ 0.17
LITAF-208ENST00000571627 LINC01565O15544 149 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 LIG1P18858 919 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
LITAF-208ENST00000571627 BCAR1P56945 870 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 ERVFC1P60507 584 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 GRIN1Q05586 938 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 NCBP1Q09161 790 aaKnown RBP16.09■□□□□ 0.17
LITAF-208ENST00000571627 ZBTB8OSQ8IWT0 167 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 PABPC5Q96DU9 382 aaKnown RBP16.09■□□□□ 0.17
LITAF-208ENST00000571627 APOL6Q9BWW8 343 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 NXF3Q9H4D5 531 aaKnown RBP16.09■□□□□ 0.17
LITAF-208ENST00000571627 RSAD1Q9HA92 442 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
LITAF-208ENST00000571627 NPTXRO95502 500 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 EDN1P05305 212 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 SSBP05455 408 aaKnown RBP eCLIP16.08■□□□□ 0.16
LITAF-208ENST00000571627 ITGA4P13612 1032 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 PPM1AP35813 382 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 NAMPTP43490 491 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 UBE3AQ05086 875 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 RNASELQ05823 741 aaKnown RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 COL19A1Q14993 1142 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 HYIQ5T013 277 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 RBM23Q86U06 439 aaKnown RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 CABP7Q86V35 215 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 TMEM173Q86WV6 379 aaPredicted RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 ZNF280BQ86YH2 543 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 DAW1Q8N136 415 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 SLC39A11Q8N1S5 342 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 DEPTORQ8TB45 409 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 URGCPQ8TCY9 931 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 KIFAP3Q92845 792 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 CCDC51Q96ER9 411 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 IFT74Q96LB3 600 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 TRIM6Q9C030 488 aaPredicted RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 CCDC113Q9H0I3 377 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 C2orf40Q9H1Z8 148 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 NRDE2Q9H7Z3 1164 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 PRMT7Q9NVM4 692 aaPredicted RBP16.08■□□□□ 0.16
LITAF-208ENST00000571627 SPG21Q9NZD8 308 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 CLIC4Q9Y696 253 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 CNTNAP2Q9UHC6 1331 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 C5orf42Q9H799 3197 aa16.08■□□□□ 0.16
LITAF-208ENST00000571627 MUC3AQ02505 3323 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 HIP1RO75146 1068 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 POMCP01189 267 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 PRKCBP05771 671 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 LTBRP36941 435 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 MLH1P40692 756 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 NRIP1P48552 1158 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 ALDH7A1P49419 539 aaKnown RBP16.07■□□□□ 0.16
LITAF-208ENST00000571627 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
LITAF-208ENST00000571627 DLX2Q07687 328 aaPredicted RBP16.07■□□□□ 0.16
LITAF-208ENST00000571627 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms