RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 M0QZ92 97 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 RPP40O75818 363 aaKnown RBP7.99□□□□□ -1.13
CHD3-213ENST00000571249 CAVIN2O95810 425 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 SLC3A2P08195 630 aaKnown RBP7.99□□□□□ -1.13
CHD3-213ENST00000571249 CHRNB1P11230 501 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 FSHRP23945 695 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 MARK3P27448 753 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 GIT2Q14161 759 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 CCNI2Q6ZMN8 369 aaPredicted RBP7.99□□□□□ -1.13
CHD3-213ENST00000571249 Q6ZS52 159 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 WDR5BQ86VZ2 330 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 ERC1Q8IUD2 1116 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 RNF169Q8NCN4 708 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 ARHGAP45Q92619 1136 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 PHKBQ93100 1093 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 IGSF21Q96ID5 467 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 PDCD2LQ9BRP1 358 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 RHOBTB2Q9BYZ6 727 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 CPVLQ9H3G5 476 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 CDH7Q9ULB5 785 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 TNNQ9UQP3 1299 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 PCDHGA5Q9Y5G8 931 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 ITPR2Q14571 2701 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 ABCB11O95342 1321 aa7.99□□□□□ -1.13
CHD3-213ENST00000571249 A0A087WV48 116 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 PATE3B3GLJ2 98 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 C2CD2LO14523 706 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 RPS6KA5O75582 802 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 CFBP00751 764 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 CDK11BP21127 795 aaKnown RBP7.98□□□□□ -1.13
CHD3-213ENST00000571249 ITPKBP27987 946 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 NOVP48745 357 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 POLGP54098 1239 aaPredicted RBP7.98□□□□□ -1.13
CHD3-213ENST00000571249 CREB5Q02930 508 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 SLFN5Q08AF3 891 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 WDR44Q5JSH3 913 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 POTEHQ6S545 545 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 METTL7BQ6UX53 244 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 MARCH9Q86YJ5 346 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 IFNL3Q8IZI9 196 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 SPEM1Q8N4L4 309 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 PNPLA1Q8N8W4 532 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 ITFG1Q8TB96 612 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 HELQQ8TDG4 1101 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 TRAPPC12Q8WVT3 735 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 GAB3Q8WWW8 586 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 FGF13Q92913 245 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 TMEM47Q9BQJ4 181 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 PHF20Q9BVI0 1012 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 EMILIN2Q9BXX0 1053 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 UBA5Q9GZZ9 404 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 GOLGA4Q13439 2230 aaKnown RBP7.98□□□□□ -1.13
CHD3-213ENST00000571249 GON4LQ3T8J9 2241 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
CHD3-213ENST00000571249 POM121CA8CG34 1229 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 ZC3H11AO75152 810 aaKnown RBP eCLIP7.97□□□□□ -1.13
CHD3-213ENST00000571249 RPLP2P05387 115 aaKnown RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 IFIT2P09913 472 aaKnown RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 PDHBP11177 359 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 TOP1P11387 765 aaKnown RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 KRT10P13645 584 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 IRX4P78413 519 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 KRT76Q01546 638 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 PPARAQ07869 468 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 CYP4F3Q08477 520 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 ZNF543Q08ER8 600 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 NEDD9Q14511 834 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 DSC3Q14574 896 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 PGM5Q15124 567 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 CDC37Q16543 378 aaPredicted RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 PLK5Q496M5 336 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 CYP26C1Q6V0L0 522 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 GRASPQ7Z6J2 395 aaPredicted RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 ABI1Q8IZP0 508 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 LSM14AQ8ND56 463 aaKnown RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 RHPN1Q8TCX5 695 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 OSBP2Q969R2 916 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 SLC32A1Q9H598 525 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 PRORYQ9H606 182 aa7.97□□□□□ -1.13
CHD3-213ENST00000571249 ELAC1Q9H777 363 aaKnown RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 MRPL11Q9Y3B7 192 aaKnown RBP7.97□□□□□ -1.13
CHD3-213ENST00000571249 H0Y626 953 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 NRG2O14511 850 aaPredicted RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 DCLK1O15075 740 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 TEX28O15482 410 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 MEFVO15553 781 aaPredicted RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 GPAA1O43292 621 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 HOXA2O43364 376 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 B4GALT3O60512 393 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 RANBP6O60518 1105 aaKnown RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 PAPSS2O95340 614 aaPredicted RBP7.96□□□□□ -1.14
CHD3-213ENST00000571249 TRIM16O95361 564 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 OATP04181 439 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 GALTP07902 379 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 GOLGA8HP0CJ92 632 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 CCDC192P0DO97 292 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 INSRRP14616 1297 aa7.96□□□□□ -1.14
CHD3-213ENST00000571249 ATP5JP18859 108 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms