RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SLC16A4O15374 487 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ASAP2O43150 1006 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 TREHO43280 583 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 KLRC4O43908 158 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 PQBP1O60828 265 aaKnown RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ERLIN2O94905 339 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 VTNP04004 478 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 SRGAP2CP0DJJ0 459 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAPTP10636 758 aaKnown RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 SFPQP23246 707 aaKnown RBP eCLIP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 GLRA2P23416 452 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 NPTX2P47972 431 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 SARSP49591 514 aaKnown RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 NCKAP1LP55160 1127 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 SOX10P56693 466 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF445P59923 1031 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 LAMTOR4Q0VGL1 99 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 PAK1Q13153 545 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 PTK7Q13308 1070 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 CAPSQ13938 189 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ANO6Q4KMQ2 910 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 GDF6Q6KF10 455 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 RUFY4Q6ZNE9 571 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 HS2ST1Q7LGA3 356 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 NECAB2Q7Z6G3 386 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF410Q86VK4 478 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 NELFCDQ8IXH7 590 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 SMYD4Q8IYR2 804 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 DAW1Q8N136 415 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 PRPF31Q8WWY3 499 aaKnown RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 HLA-CQ95604 372 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 THAP11Q96EK4 314 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ACCSQ96QU6 501 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 KIFC3Q9BVG8 833 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 INO80BQ9C086 356 aaPredicted RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 DNAJC25Q9H1X3 360 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 C11orf49Q9H6J7 331 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 POLD4Q9HCU8 107 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 GDAQ9Y2T3 454 aa7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNFX1Q9P2E3 1918 aaKnown RBP7.24□□□□□ -1.25
CTDNEP1-204ENST00000570484 GOLGA6L19H0YKK7 550 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 HNRNPDLO14979 420 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 CAND2O75155 1236 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 PRKCBP05771 671 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 CTSHP09668 335 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MYBP10242 640 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 NMT1P30419 496 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 HOXC8P31273 242 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 ARL2P36404 184 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 THPOP40225 353 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MATR3P43243 847 aaKnown RBP eCLIP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZNF165P49910 485 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 LIG4P49917 911 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MRPS6P82932 125 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MYL5Q02045 173 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 NCBP1Q09161 790 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 TMEM62Q0P6H9 643 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 STK4Q13043 487 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 DRP2Q13474 957 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 BFSP2Q13515 415 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 HSP90AA2PQ14568 343 aaPredicted RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAPK6Q16659 721 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 KIZQ2M2Z5 673 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MARCH8Q5T0T0 291 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 HAUS6Q7Z4H7 955 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 APBB1IPQ7Z5R6 666 aaPredicted RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 SERINC5Q86VE9 423 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAP4K3Q8IVH8 894 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 SCUBE3Q8IX30 993 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 NME8Q8N427 588 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 GUF1Q8N442 669 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 KIAA0895Q8NCT3 520 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 GOLGA5Q8TBA6 731 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 CAGE1Q8TC20 777 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 FAM200AQ8TCP9 573 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 DIS3LQ8TF46 1054 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 DNAJB3Q8WWF6 145 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 NELFBQ8WX92 580 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 HPS3Q969F9 1004 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 ZBTB10Q96DT7 871 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 CEP89Q96ST8 783 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 GCOM2Q9BZD3 368 aaPredicted RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 TMEM206Q9H813 350 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 PDLIM7Q9NR12 457 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 TRMT13Q9NUP7 481 aaKnown RBP7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 MAPK8IP1Q9UQF2 711 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 ATP11BQ9Y2G3 1177 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 SLC27A5Q9Y2P5 690 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 TRPV2Q9Y5S1 764 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 DOCK5Q9H7D0 1870 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 LOXHD1Q8IVV2 1947 aa7.23□□□□□ -1.25
CTDNEP1-204ENST00000570484 CEP350Q5VT06 3117 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 A0A087WZ62 844 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 K7ERI5 159 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 CALUO43852 315 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 B4GALT4O60513 344 aa7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 PRPF6O94906 941 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-204ENST00000570484 FGFR1OPO95684 399 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms