RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SKIP12755 728 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 AVPR2P30518 371 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 HOXA11P31270 313 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 YWHABP31946 246 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 RAB27AP51159 221 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 ITIH3Q06033 890 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 NR5A1Q13285 461 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 EMC2Q15006 297 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 ATAT1Q5SQI0 421 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 UBXN11Q5T124 520 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 PPP4R3AQ6IN85 833 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 DDX53Q86TM3 631 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 CABP7Q86V35 215 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 TPH2Q8IWU9 490 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 URGCPQ8TCY9 931 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 SLC22A17Q8WUG5 538 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 PSPC1Q8WXF1 523 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 PGBD4Q96DM1 585 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 CPB2Q96IY4 423 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 FAM20AQ96MK3 541 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 JPH2Q9BR39 696 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 APOL6Q9BWW8 343 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 DHX33Q9H6R0 707 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 RSAD1Q9HA92 442 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 DBR1Q9UK59 544 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 PRG3Q9Y2Y8 225 aaPredicted RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 NR2E1Q9Y466 385 aa9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 RIF1Q5UIP0 2472 aaKnown RBP9.62□□□□□ -0.87
CTDNEP1-203ENST00000570385 H0Y858 1186 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 PFKFB2O60825 505 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 CDKL5O76039 1030 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 ALDH2P05091 517 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 GCFC2P16383 781 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 XBP1P17861 261 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 KLRC2P26717 231 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 MTHFRP42898 656 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 PTPN5P54829 565 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 EPHA7Q15375 998 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 PTPN14Q15678 1187 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 TAS1R1Q7RTX1 841 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 FERMT3Q86UX7 667 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 C4orf19Q8IY42 314 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 TDRD5Q8NAT2 981 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 RIPOR3Q96MK2 946 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 NECTIN4Q96NY8 510 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 KLHL5Q96PQ7 755 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 EIF2AQ9BY44 585 aaKnown RBP9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 RNF39Q9H2S5 420 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 FAN1Q9Y2M0 1017 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 HES2Q9Y543 173 aa9.61□□□□□ -0.87
CTDNEP1-203ENST00000570385 F8W810 466 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 INO80B-WBP1J3KQ70 363 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 WNT7AO00755 349 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 NRP1O14786 923 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 EPB41L2O43491 1005 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 DKC1O60832 514 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 ERLIN2O94905 339 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 BAG4O95429 457 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 LARGE1O95461 756 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 CNPP09543 421 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 ITGA4P13612 1032 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 FDPSP14324 419 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 MLH1P40692 756 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 RFC5P40937 340 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 OR1G1P47890 313 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 AK2P54819 239 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 SPIRE1Q08AE8 756 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 MAEAQ7L5Y9 396 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 OTUD6AQ7L8S5 288 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 MRPL10Q7Z7H8 261 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 CDR2LQ86X02 465 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 SMG8Q8ND04 991 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 ASAP3Q8TDY4 903 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 RABGGTAQ92696 567 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 ATOH1Q92858 354 aaPredicted RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 GAD1Q99259 594 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 MTRQ99707 1265 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 EIF2AK1Q9BQI3 630 aaKnown RBP9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 ZSWIM4Q9H7M6 989 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 XPNPEP1Q9NQW7 623 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 DZANK1Q9NVP4 752 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 SORCS3Q9UPU3 1222 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 IRAK3Q9Y616 596 aa9.6□□□□□ -0.87
CTDNEP1-203ENST00000570385 KMT2EQ8IZD2 1858 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 STK36Q9NRP7 1315 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 TBX3O15119 743 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 TSPAN1O60635 241 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 SLITRK3O94933 977 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 SPATA31D3P0C874 917 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 ATP2B1P20020 1258 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 AKAP5P24588 427 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 KRT2P35908 639 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 TXKP42681 527 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 CLCN4P51793 760 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms