RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CLLU1OSQ5K130 101 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 ARL6IP4Q66PJ3 421 aaKnown RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 RINT1Q6NUQ1 792 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 ZBTB8OSQ8IWT0 167 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 PDILTQ8N807 584 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 KLHL23Q8NBE8 558 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 MCPH1Q8NEM0 835 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 SP7Q8TDD2 431 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 LRRC15Q8TF66 581 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 IFT74Q96LB3 600 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 TRIM6Q9C030 488 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 IGFLR1Q9H665 355 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 AGPAT5Q9NUQ2 364 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 TMEM161AQ9NX61 479 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 DACT1Q9NYF0 836 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 FBXO2Q9UK22 296 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 PCDHB2Q9Y5E7 798 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 COL4A6Q14031 1691 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 A0A0U1RQF3 1178 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 SLC16A4O15374 487 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 BMP15O95972 392 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 EDN1P05305 212 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 PRKCBP05771 671 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 HARSP12081 509 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 ATF7P17544 494 aaPredicted RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 ARF4P18085 180 aaPredicted RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 AKAP5P24588 427 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 LONP1P36776 959 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 BMPR1AP36894 532 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 AFF1P51825 1210 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 FAM189BP81408 668 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 DNM1Q05193 864 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 NCBP1Q09161 790 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 UBXN11Q5T124 520 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 LRRC55Q6ZSA7 311 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 DYMQ7RTS9 669 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 GPBP1Q86WP2 473 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 THNSL1Q8IYQ7 743 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 CMTR2Q8IYT2 770 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 CRIPAKQ8N1N5 446 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 MICAL1Q8TDZ2 1067 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 STAMQ92783 540 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 ZNF396Q96N95 335 aaPredicted RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 CASD1Q96PB1 797 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 NT5C3AQ9H0P0 336 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 RC3H2Q9HBD1 1191 aaKnown RBP9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 KMT5AQ9NQR1 393 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 PARP2Q9UGN5 583 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 PCDHGC5Q9Y5F6 944 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 MYH11P35749 1972 aa9.97□□□□□ -0.81
GTF3C1-210ENST00000569394 H3BNC9 293 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 SPTLC2O15270 562 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 ZC3H11AO75152 810 aaKnown RBP eCLIP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 ITGA4P13612 1032 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 SLC12A3P55017 1021 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 OSTNP61366 133 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 TFF2Q03403 129 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 RNASELQ05823 741 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 PRPF4BQ13523 1007 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 BECN1Q14457 450 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 SLC39A14Q15043 492 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 TMEM119Q4V9L6 283 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 C1orf186Q6ZWK4 172 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 RBM23Q86U06 439 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 DAW1Q8N136 415 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 SYT2Q8N9I0 419 aaPredicted RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 RABGGTAQ92696 567 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 RAD54LQ92698 747 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 AK8Q96MA6 479 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 TMEM117Q9H0C3 514 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 NXF3Q9H4D5 531 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 CHST12Q9NRB3 414 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 BLOC1S4Q9NUP1 217 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 TBC1D7Q9P0N9 293 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 CCDC39Q9UFE4 941 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 GDAQ9Y2T3 454 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 IPPQ9Y573 584 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 SRPRBQ9Y5M8 271 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 PRRC2BQ5JSZ5 2229 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 PLXNA4Q9HCM2 1894 aa9.96□□□□□ -0.82
GTF3C1-210ENST00000569394 K7ERI5 159 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 FAM13AO94988 1023 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 ITGB1P05556 798 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 MUTP22033 750 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 DNAJB1P25685 340 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 GTF2F1P35269 517 aaKnown RBP eCLIP9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 IRS1P35568 1242 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 NPTX2P47972 431 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 ME1P48163 572 aa9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 DMP1Q13316 513 aaPredicted RBP9.95□□□□□ -0.82
GTF3C1-210ENST00000569394 MAPK6Q16659 721 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms