RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 CHMP2AO43633 222 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 NEMFO60524 1076 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 XRCC6P12956 609 aaKnown RBP eCLIP10.29□□□□□ -0.76
CAPN3-219ENST00000569136 PDCP20941 246 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 MSX1P28360 303 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 DNM2P50570 870 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
CAPN3-219ENST00000569136 GUCY1B3Q02153 619 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 MBTPS1Q14703 1052 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 ARSJQ5FYB0 599 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-219ENST00000569136 SH3PXD2AQ5TCZ1 1133 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 LARP1BQ659C4 914 aaKnown RBP10.29□□□□□ -0.76
CAPN3-219ENST00000569136 RUFY4Q6ZNE9 571 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 METTL13Q8N6R0 699 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 DBF4BQ8NFT6 615 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 MTMR9Q96QG7 549 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 CELF4Q9BZC1 486 aaKnown RBP10.29□□□□□ -0.76
CAPN3-219ENST00000569136 FAM49AQ9H0Q0 323 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-219ENST00000569136 ZSWIM4Q9H7M6 989 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 PCDHA11Q9Y5I1 949 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 KDM3AQ9Y4C1 1321 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 ZBTB42B2RXF5 422 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 ZNF862O60290 1169 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 F11P03951 625 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 AMHP03971 560 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 PDIA4P13667 645 aaKnown RBP10.28□□□□□ -0.76
CAPN3-219ENST00000569136 ATP2B1P20020 1258 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 GJB2P29033 226 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 MCM7P33993 719 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 TXLNAP40222 546 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 TXKP42681 527 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 PRKCEQ02156 737 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 TBC1D8BQ0IIM8 1120 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 CUL4AQ13619 759 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 TARBP2Q15633 366 aaKnown RBP10.28□□□□□ -0.76
CAPN3-219ENST00000569136 ZNF174Q15697 407 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 C4orf19Q8IY42 314 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 CLP1Q92989 425 aaKnown RBP10.28□□□□□ -0.76
CAPN3-219ENST00000569136 GJA10Q969M2 543 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
CAPN3-219ENST00000569136 MAP7D2Q96T17 732 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 RAD9AQ99638 391 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 HSD17B14Q9BPX1 270 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 MKNK1Q9BUB5 465 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 FTHL17Q9BXU8 183 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 RUBCNLQ9H714 662 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 TTC12Q9H892 705 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-219ENST00000569136 SLC28A3Q9HAS3 691 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 VAV3Q9UKW4 847 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 TRPV2Q9Y5S1 764 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 IGSF9BQ9UPX0 1349 aa10.28□□□□□ -0.76
CAPN3-219ENST00000569136 EML1O00423 815 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 LAD1O00515 517 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 GPR182O15218 404 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 SLITRK3O94933 977 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 LYPLA2O95372 231 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 C22orf31O95567 290 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 CTSHP09668 335 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 WEE1P30291 646 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 CRYBB1P53674 252 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-219ENST00000569136 MGAT3Q09327 533 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 PDIA5Q14554 519 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 FBXO47Q5MNV8 452 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 MCTP1Q6DN14 999 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 TSHZ1Q6ZSZ6 1077 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 TRMT1LQ7Z2T5 733 aaKnown RBP10.27□□□□□ -0.77
CAPN3-219ENST00000569136 HERC6Q8IVU3 1022 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 NEK9Q8TD19 979 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 TRAPPC12Q8WVT3 735 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 SNX21Q969T3 373 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 PBX4Q9BYU1 374 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 IFIH1Q9BYX4 1025 aaKnown RBP10.27□□□□□ -0.77
CAPN3-219ENST00000569136 ZNF576Q9H609 170 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 USTQ9Y2C2 406 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
CAPN3-219ENST00000569136 FRMPD3Q5JV73 1810 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 ENPP3O14638 875 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 MAFO75444 373 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-219ENST00000569136 STBD1O95210 358 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 GHRP10912 638 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 MUTP22033 750 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 WDR5P61964 334 aaKnown RBP10.26□□□□□ -0.77
CAPN3-219ENST00000569136 PDE4CQ08493 712 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 LPIN1Q14693 890 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 TMEM266Q2M3C6 531 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 NCAPH2Q6IBW4 605 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 TPH2Q8IWU9 490 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 ZNF295-AS1Q8N0V1 137 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 ERMNQ8TAM6 284 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 TOP1MTQ969P6 601 aa10.26□□□□□ -0.77
CAPN3-219ENST00000569136 EIF2AK1Q9BQI3 630 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms