RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 DSC3Q14574 896 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 MXD4Q14582 209 aaPredicted RBP20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 TMEM119Q4V9L6 283 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 NAALADL2Q58DX5 795 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 HFE2Q6ZVN8 426 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 RNF135Q8IUD6 432 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 RNF149Q8NC42 400 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 CDK5RAP3Q96JB5 506 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 PLIN2Q99541 437 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 ADAM2Q99965 735 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 NT5C3AQ9H0P0 336 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 CSRNP2Q9H175 543 aa20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 SRPRBQ9Y5M8 271 aaKnown RBP20.3■□□□□ 0.84
SYNGR3-205ENST00000568896 DENND3A2RUS2 1198 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 SLC26A4O43511 780 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 SFPQP23246 707 aaKnown RBP eCLIP20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 GLRA2P23416 452 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 NRIP1P48552 1158 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 CAPSQ13938 189 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 KCTD17Q8N5Z5 321 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 LINC00301Q8NCQ3 95 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 INO80BQ9C086 356 aaPredicted RBP20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 TFIP11Q9UBB9 837 aaKnown RBP20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 PCDHB7Q9Y5E2 793 aa20.29■□□□□ 0.84
SYNGR3-205ENST00000568896 TRIOO75962 3097 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 BRD1O95696 1058 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 SARSP49591 514 aaKnown RBP20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 STK38Q15208 465 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 FAM102BQ5T8I3 360 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 EFHBQ8N7U6 833 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 CALML4Q96GE6 196 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 FBXL18Q96ME1 805 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 CLIC6Q96NY7 704 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 POP1Q99575 1024 aaKnown RBP20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 MINDY3Q9H8M7 445 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 RGS18Q9NS28 235 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 HCSTQ9UBK5 93 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 BARX2Q9UMQ3 279 aaPredicted RBP20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 ZDHHC9Q9Y397 364 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 WDFY4Q6ZS81 3184 aa20.28■□□□□ 0.84
SYNGR3-205ENST00000568896 PIEZO1Q92508 2521 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 PER2O15055 1255 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 YEATS4O95619 227 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 GLP2RO95838 553 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 PHKA2P46019 1235 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 PTENP60484 403 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 RBM10P98175 930 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 TFDP1Q14186 410 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 KARSQ15046 597 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 HERC4Q5GLZ8 1057 aaPredicted RBP20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 SPECC1Q5M775 1068 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 USP49Q70CQ1 688 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 SRGAP1Q7Z6B7 1085 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 IFNLR1Q8IU57 520 aaPredicted RBP20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 KRI1Q8N9T8 703 aaKnown RBP20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 EPSTI1Q96J88 318 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 RUSC1Q9BVN2 902 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 CCSER1Q9C0I3 900 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 C1orf112Q9NSG2 853 aa20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
SYNGR3-205ENST00000568896 TBKBP1A7MCY6 615 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 C9IYK1 514 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 SPTLC2O15270 562 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 PLCG1P19174 1290 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 POU5F1BQ06416 359 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 SPOUT1Q5T280 376 aaKnown RBP20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 SLC24A5Q71RS6 500 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 CATSPER4Q7RTX7 472 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 MICAL1Q8TDZ2 1067 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 LRRC15Q8TF66 581 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 BSNDQ8WZ55 320 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 PPP2R3CQ969Q6 453 aa20.26■□□□□ 0.83
SYNGR3-205ENST00000568896 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 ERVFC1P60507 584 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 COASYQ13057 564 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 RINT1Q6NUQ1 792 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 SYT2Q8N9I0 419 aaPredicted RBP20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 SMRP1Q8NCR6 262 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 RASSF8Q8NHQ8 419 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 NFKBIZQ9BYH8 718 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 TLE6Q9H808 572 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 POLD4Q9HCU8 107 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 AGPAT5Q9NUQ2 364 aa20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 TYW1Q9NV66 732 aaKnown RBP20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 PIN4Q9Y237 131 aaKnown RBP20.25■□□□□ 0.83
SYNGR3-205ENST00000568896 LRRIQ4A6NIV6 560 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 PPP6R2O75170 966 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 SSBP05455 408 aaKnown RBP eCLIP20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 PLA2G4BP0C869 781 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 SLC12A3P55017 1021 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 NHLH1Q02575 133 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 MBTD1Q05BQ5 628 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 ATL3Q6DD88 541 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 C1orf186Q6ZWK4 172 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 VN1R2Q8NFZ6 395 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 EDAQ92838 391 aa20.24■□□□□ 0.83
SYNGR3-205ENST00000568896 KIFAP3Q92845 792 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms