RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 NFASCO94856 1347 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 CCDC195A0A1B0GUA6 201 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 DDAH1O94760 285 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 ZSCAN22P10073 491 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 TDGF1P13385 188 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 LAMP2P13473 410 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 PMLP29590 882 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 MCM4P33991 863 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 CLCN3P51790 818 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 STK3Q13188 491 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 FZD5Q13467 585 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 GIT2Q14161 759 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 ACAP1Q15027 740 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 ZNF280BQ86YH2 543 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 LPPQ93052 612 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 ANP32EQ9BTT0 268 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 RHOBTB2Q9BYZ6 727 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 MAN1C1Q9NR34 630 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 SPATA6Q9NWH7 488 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 ZDHHC9Q9Y397 364 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 NUMBLQ9Y6R0 609 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 COL1A2P08123 1366 aa13.41□□□□□ -0.26
VPS9D1-207ENST00000568691 CPLX1O14810 134 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 MAFGO15525 162 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 LAMTOR5O43504 91 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 KLRC2P26717 231 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 AFF1P51825 1210 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 NLRP11P59045 1033 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 SPEM2Q0P670 501 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 PKP1Q13835 747 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 LONRF3Q496Y0 759 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 ZNF484Q5JVG2 852 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 FGF14Q92915 247 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 CUL5Q93034 780 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 NXPE3Q969Y0 559 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 AGO4Q9HCK5 861 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 SETXQ7Z333 2677 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-207ENST00000568691 KANSL1LA0AUZ9 987 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 INPPL1O15357 1258 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 GDF9O60383 454 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 EFEMP2O95967 443 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 CD72P21854 359 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 SLC26A2P50443 739 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 MRPL9Q9BYD2 267 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 PRMT8Q9NR22 394 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 RBM28Q9NW13 759 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 NAP1L2Q9ULW6 460 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 MTMR6Q9Y217 621 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 IGF2RP11717 2491 aa13.39□□□□□ -0.27
VPS9D1-207ENST00000568691 TEX28O15482 410 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 DDHD2O94830 711 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 F13A1P00488 732 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 ZSCAN20P17040 1043 aaPredicted RBP13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 CCT2P78371 535 aaKnown RBP13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 LPAL2Q16609 132 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 RTN1Q16799 776 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 LARP1BQ659C4 914 aaKnown RBP13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 PARM1Q6UWI2 310 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 CATIPQ7Z7H3 387 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 TMEM87AQ8NBN3 555 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 NETO1Q8TDF5 533 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 PGBD1Q96JS3 809 aa13.38□□□□□ -0.27
VPS9D1-207ENST00000568691 MIA3Q5JRA6 1907 aa13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 hCG_1642624A0A1W2PR95 340 aa13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 FAM170BA6NMN3 283 aa13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 DDX39AO00148 427 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 TBC1D4O60343 1298 aa13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 JAK2O60674 1132 aa13.37□□□□□ -0.27
VPS9D1-207ENST00000568691 OFD1O75665 1012 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms