RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SCRN1Q12765 414 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 NCAPH2Q6IBW4 605 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 GALNT17Q6IS24 598 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 PIK3AP1Q6ZUJ8 805 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 NEK8Q86SG6 692 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 CABP7Q86V35 215 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 URGCPQ8TCY9 931 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 HAS1Q92839 578 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 ATOH1Q92858 354 aaPredicted RBP17.36■□□□□ 0.37
NME3-211ENST00000568561 PGBD4Q96DM1 585 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 JPH2Q9BR39 696 aaPredicted RBP17.36■□□□□ 0.37
NME3-211ENST00000568561 DHX33Q9H6R0 707 aaKnown RBP17.36■□□□□ 0.37
NME3-211ENST00000568561 RSAD1Q9HA92 442 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 PDRG1Q9NUG6 133 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 RGL1Q9NZL6 768 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 SPTBN4Q9H254 2564 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 DMDP11532 3685 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 ZBTB39O15060 712 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 CCNT1O60563 726 aaKnown RBP17.35■□□□□ 0.37
NME3-211ENST00000568561 CYP4A11Q02928 519 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 EMC2Q15006 297 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 EARS2Q5JPH6 523 aaKnown RBP17.35■□□□□ 0.37
NME3-211ENST00000568561 ATAT1Q5SQI0 421 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 UBALD2Q8IYN6 164 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 TMEM105Q8N8V8 129 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 PSPC1Q8WXF1 523 aaKnown RBP17.35■□□□□ 0.37
NME3-211ENST00000568561 DYDC2Q96IM9 177 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 PRG3Q9Y2Y8 225 aaPredicted RBP17.35■□□□□ 0.37
NME3-211ENST00000568561 CFAP54Q96N23 3096 aa17.35■□□□□ 0.37
NME3-211ENST00000568561 C2CD2LO14523 706 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 P4HBP07237 508 aaKnown RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 CNPP09543 421 aaKnown RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 MYBP10242 640 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 HOXA11P31270 313 aaPredicted RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 YWHABP31946 246 aaKnown RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 GIT2Q14161 759 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 CTTNQ14247 550 aaKnown RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 RIF1Q5UIP0 2472 aaKnown RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 RNF149Q8NC42 400 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 FAM20AQ96MK3 541 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 KLHL5Q96PQ7 755 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 FAM193BQ96PV7 902 aaPredicted RBP17.34■□□□□ 0.37
NME3-211ENST00000568561 TM6SF1Q9BZW5 370 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 SFXN1Q9H9B4 322 aa17.34■□□□□ 0.37
NME3-211ENST00000568561 F8W810 466 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 NRP1O14786 923 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 MARCH6O60337 910 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 GFRA3O60609 400 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 KLRC2P26717 231 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 RFC5P40937 340 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 EPHA7Q15375 998 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 XKR9Q5GH70 373 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 PPP4R3AQ6IN85 833 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 SRGAP1Q7Z6B7 1085 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 ZDHHC14Q8IZN3 488 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 FAM177A1Q8N128 213 aaPredicted RBP17.33■□□□□ 0.36
NME3-211ENST00000568561 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
NME3-211ENST00000568561 EIF2AQ9BY44 585 aaKnown RBP17.33■□□□□ 0.36
NME3-211ENST00000568561 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 MARCH5Q9NX47 278 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 FAN1Q9Y2M0 1017 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 HES2Q9Y543 173 aa17.33■□□□□ 0.36
NME3-211ENST00000568561 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 CNTNAP2Q9UHC6 1331 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 GALR2O43603 387 aaPredicted RBP17.32■□□□□ 0.36
NME3-211ENST00000568561 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
NME3-211ENST00000568561 CDKL5O76039 1030 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 GCFC2P16383 781 aaKnown RBP17.32■□□□□ 0.36
NME3-211ENST00000568561 CLCN4P51793 760 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 SPIRE1Q08AE8 756 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 TAS1R1Q7RTX1 841 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 GPR149Q86SP6 731 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 FERMT3Q86UX7 667 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 C4orf19Q8IY42 314 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 CPB2Q96IY4 423 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 APOL6Q9BWW8 343 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 XPNPEP1Q9NQW7 623 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 TPCN1Q9ULQ1 816 aa17.32■□□□□ 0.36
NME3-211ENST00000568561 PTPRZ1P23471 2315 aaPredicted RBP17.31■□□□□ 0.36
NME3-211ENST00000568561 CARNS1A5YM72 827 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 TSPAN1O60635 241 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 ERLIN2O94905 339 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 ITGA4P13612 1032 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
NME3-211ENST00000568561 MLH1P40692 756 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 OR1G1P47890 313 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 AK2P54819 239 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 NR5A1Q13285 461 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 CCDC149Q6ZUS6 474 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 TPH2Q8IWU9 490 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 ZFP42Q96MM3 310 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 GAD1Q99259 594 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 MTRQ99707 1265 aa17.31■□□□□ 0.36
NME3-211ENST00000568561 TMEM175Q9BSA9 504 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms