RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 ECHDC2Q86YB7 292 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 SPIRE2Q8WWL2 714 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 DDX12PQ92771 950 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 ZNF689Q96CS4 500 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-220ENST00000567720 DNAJC19Q96DA6 116 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 PRIMPOLQ96LW4 560 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 YME1L1Q96TA2 773 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 TRAIPQ9BWF2 469 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 TNMDQ9H2S6 317 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 CUEDC2Q9H467 287 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 KMT5AQ9NQR1 393 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 RNF19AQ9NV58 838 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 TMEM161AQ9NX61 479 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 HPSEQ9Y251 543 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 USP20Q9Y2K6 914 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 INSL6Q9Y581 213 aa18.99■□□□□ 0.63
COMMD4-220ENST00000567720 REV3LO60673 3130 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 A0A0U1RQF3 1178 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 A0A1B0GVL5 298 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 SLC16A4O15374 487 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 TBCAO75347 108 aaKnown RBP18.98■□□□□ 0.63
COMMD4-220ENST00000567720 DGKIO75912 1065 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 FAM13AO94988 1023 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 FGFR1P11362 822 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 CMA1P23946 247 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 AXLP30530 894 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 NCKAP1LP55160 1127 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 MAPK6Q16659 721 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 ZNF697Q5TEC3 545 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 NOTUMQ6P988 496 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 CDR2LQ86X02 465 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-220ENST00000567720 IQUBQ8NA54 791 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 STAMQ92783 540 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 FIZ1Q96SL8 496 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 GOLPH3LQ9H4A5 285 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 ELAC1Q9H777 363 aaKnown RBP18.98■□□□□ 0.63
COMMD4-220ENST00000567720 PARVGQ9HBI0 331 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 FAM105AQ9NUU6 356 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 KBTBD4Q9NVX7 518 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 KCNH3Q9ULD8 1083 aa18.98■□□□□ 0.63
COMMD4-220ENST00000567720 FAM237AA0A1B0GTK4 181 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 A0A1W2PQ27 194 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 A0A1W2PQ64 194 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 A0A1W2PQD8 194 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 LINC01553A4QN01 128 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 ACTN4O43707 911 aaKnown RBP18.97■□□□□ 0.63
COMMD4-220ENST00000567720 STAG3L1P0CL83 205 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 LIG1P18858 919 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 EFNA5P52803 228 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 TAP1Q03518 808 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 TMEM161BQ8NDZ6 487 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 CCDC51Q96ER9 411 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 EIF2AQ9BY44 585 aaKnown RBP18.97■□□□□ 0.63
COMMD4-220ENST00000567720 PDZD7Q9H5P4 517 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 SLC28A3Q9HAS3 691 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 LARSQ9P2J5 1176 aaKnown RBP18.97■□□□□ 0.63
COMMD4-220ENST00000567720 LRFN2Q9ULH4 789 aa18.97■□□□□ 0.63
COMMD4-220ENST00000567720 FRMD3A2A2Y4 597 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 MEIS3P2A8K0S8 358 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 ACKR2O00590 384 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 LINC00271P0C7V0 271 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 MAPTP10636 758 aaKnown RBP18.96■□□□□ 0.63
COMMD4-220ENST00000567720 RAB27AP51159 221 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 NDUFA8P51970 172 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 PRPF4BQ13523 1007 aaKnown RBP18.96■□□□□ 0.63
COMMD4-220ENST00000567720 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 PAN2Q504Q3 1202 aaKnown RBP18.96■□□□□ 0.63
COMMD4-220ENST00000567720 CLLU1OSQ5K130 101 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 SFR1Q86XK3 245 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 FSIP1Q8NA03 581 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 RNF169Q8NCN4 708 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
COMMD4-220ENST00000567720 LPPQ93052 612 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 FAM161BQ96MY7 647 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 NTPCRQ9BSD7 190 aaKnown RBP18.96■□□□□ 0.63
COMMD4-220ENST00000567720 ZHX3Q9H4I2 956 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 ZNF576Q9H609 170 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 MAGEF1Q9HAY2 307 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 PCDHB7Q9Y5E2 793 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 PCDHB2Q9Y5E7 798 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 ANK1P16157 1881 aa18.96■□□□□ 0.63
COMMD4-220ENST00000567720 A0A1B0GUA9 196 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 K7ENM7 598 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 NT5DC1Q5TFE4 455 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 EEF1DP3Q658K8 133 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 CMTR2Q8IYT2 770 aaKnown RBP18.95■□□□□ 0.62
COMMD4-220ENST00000567720 DEFB123Q8N688 67 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 MYCT1Q8N699 235 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 SMG8Q8ND04 991 aaKnown RBP18.95■□□□□ 0.62
COMMD4-220ENST00000567720 KCNN1Q92952 543 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
COMMD4-220ENST00000567720 TRIM9Q9C026 710 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 TMEM134Q9H6X4 195 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 HCSTQ9UBK5 93 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 SERTAD1Q9UHV2 236 aa18.95■□□□□ 0.62
COMMD4-220ENST00000567720 K7ERI5 159 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 ZNF623O75123 536 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 NPTXRO95502 500 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 CASP1P29466 404 aa18.94■□□□□ 0.62
COMMD4-220ENST00000567720 SMTNP53814 917 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms