RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 NAV1Q8NEY1 1877 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TUBGCP6Q96RT7 1819 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L15C9J2P7 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L13C9JLJ4 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L11C9JVI0 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L18D6R9N7 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L22D6RA61 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L17D6RBQ6 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L19D6RCP7 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L20D6RJB6 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PDHXO00330 501 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 BCRP11274 1271 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 C4BPBP20851 252 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 CYP4A11Q02928 519 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L24Q0WX57 530 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 VGLL4Q14135 290 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 RCN1Q15293 331 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 DACT2Q5SW24 774 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 USP17L6PQ6QN14 398 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 CABP7Q86V35 215 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 OR8K1Q8NGG5 319 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PCDHA4Q9UN74 947 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 AKT3Q9Y243 479 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 MRPL11Q9Y3B7 192 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PITPNM2Q9BZ72 1349 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 N4BP1O75113 896 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 KRT38O76015 456 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 H2AFXP16104 143 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 SNAPC2Q13487 334 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TLK2Q86UE8 772 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 BLIDQ8IZY5 108 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 LRGUKQ96M69 825 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 EHD2Q9NZN4 543 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 SERPINA10Q9UK55 444 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PCDHA6Q9UN73 950 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 SH3GLB1Q9Y371 365 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PCDHA8Q9Y5H6 950 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PCDHA1Q9Y5I3 950 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 MYH3P11055 1940 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 SFI1A8K8P3 1242 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 GUCY1B2O75343 617 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 NR1I2O75469 434 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 CCDC166P0CW27 439 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 KRT3P12035 628 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 SERPINB1P30740 379 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 NUP107P57740 925 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TMEM62Q0P6H9 643 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PATL1Q86TB9 770 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 NUDCD3Q8IVD9 361 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PROCA1Q8NCQ7 364 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 ZNF473Q8WTR7 871 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 NUDCD1Q96RS6 583 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 ATAD3AQ9NVI7 634 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 FAM198AQ9UFP1 575 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 DIS3Q9Y2L1 958 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PFKFB2O60825 505 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TRIM16O95361 564 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 DNM2P50570 870 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 ITGB3BPQ13352 177 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 KCTD2Q14681 263 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PRAMEF19Q5SWL8 479 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PCNX4Q63HM2 1172 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TMEM179Q6ZVK1 233 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TMTC3Q6ZXV5 915 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 THAP11Q96EK4 314 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 BPIFA3Q9BQP9 254 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 MAD2L2Q9UI95 211 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 WDR19Q8NEZ3 1342 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TMEM110-MUSTN1A8MSY1 372 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 H0YCG3 227 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 CMA1P23946 247 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 GYS2P54840 703 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 PPP2R2AP63151 447 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 NR5A1Q13285 461 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 DCTN2Q13561 401 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 CWF19L1Q69YN2 538 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 GLG1Q92896 1179 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 NAF1Q96HR8 494 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 AK8Q96MA6 479 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 TRIM15Q9C019 465 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 MCM8Q9UJA3 840 aa6.38□□□□□ -1.39
CNOT1-211ENST00000567188 G3BP2Q9UN86 482 aaKnown RBP6.38□□□□□ -1.39
CNOT1-211ENST00000567188 DAPK3O43293 454 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 FAM107AO95990 144 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 SCG2P13521 617 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 TAF1CQ15572 869 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-211ENST00000567188 C16orf86Q6ZW13 317 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 GSDMAQ96QA5 445 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 SERTAD1Q9UHV2 236 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 ANGPTL3Q9Y5C1 460 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 PPP6R2O75170 966 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 GSCP56915 257 aaPredicted RBP6.37□□□□□ -1.39
CNOT1-211ENST00000567188 PABPC4Q13310 644 aaKnown RBP eCLIP6.37□□□□□ -1.39
CNOT1-211ENST00000567188 SPDYE2Q495Y8 402 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 LIN9Q5TKA1 542 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 C12orf60Q5U649 245 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 DIS3L2Q8IYB7 885 aaKnown RBP6.37□□□□□ -1.39
CNOT1-211ENST00000567188 SCYL3Q8IZE3 742 aa6.37□□□□□ -1.39
CNOT1-211ENST00000567188 DYDC2Q96IM9 177 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms