RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 SPATA33Q96N06 139 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 PANX2Q96RD6 677 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 GPR20Q99678 358 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 CBWD1Q9BRT8 395 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 TTYH3Q9C0H2 523 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 LARSQ9P2J5 1176 aaKnown RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 CAPN11Q9UMQ6 739 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 FCF1Q9Y324 198 aaKnown RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 LUC7L2Q9Y383 392 aaKnown RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHD9-217ENST00000565832 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TMEM88BA6NKF7 163 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 FANCGO15287 622 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 CALUO43852 315 aaPredicted RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 STX10O60499 249 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 KIF20AO95235 890 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 FGFR1OPO95684 399 aaKnown RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 GJB1P08034 283 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TGFB3P10600 412 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TNNT1P13805 278 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ADSSP30520 456 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ADCYAP1R1P41586 468 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 NEDD9Q14511 834 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 FKBP15Q5T1M5 1219 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 METTL7BQ6UX53 244 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 MAMDC4Q6UXC1 1216 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 RASAL3Q86YV0 1011 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 RNF135Q8IUD6 432 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ZC3H3Q8IXZ2 948 aaKnown RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 DHX37Q8IY37 1157 aaKnown RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 TMEM161BQ8NDZ6 487 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ACRBPQ8NEB7 543 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 RDM1Q8NG50 284 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 OR8K1Q8NGG5 319 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 SEPT1Q8WYJ6 367 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 BAP1Q92560 729 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 CEP63Q96MT8 703 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ERGIC2Q96RQ1 377 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 CEP89Q96ST8 783 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 GBP3Q9H0R5 595 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 RNPEPQ9H4A4 650 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 SUGCTQ9HAC7 445 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 NLRC4Q9NPP4 1024 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.321e-6■■■■■ 60.7
CHD9-217ENST00000565832 SEL1LQ9UBV2 794 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ARMCX3Q9UH62 379 aaPredicted RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 PPP2R2CQ9Y2T4 447 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 PLXNA1Q9UIW2 1896 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 FAM170AA1A519 330 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 DENND3A2RUS2 1198 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 NOP56O00567 594 aaKnown RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 EIF3DO15371 548 aaKnown RBP eCLIP6.81□□□□□ -1.32
CHD9-217ENST00000565832 ARHGAP6O43182 974 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ADCY6O43306 1168 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TPM2P07951 284 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TRIM49P0CI25 452 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TRIM49CP0CI26 452 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 CCNA1P78396 465 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 GTF2BQ00403 316 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 NCOA4Q13772 614 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 PTPN14Q15678 1187 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 XKR3Q5GH77 459 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 GJB7Q6PEY0 223 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 RRAGAQ7L523 313 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TAS1R3Q7RTX0 852 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 CNGA4Q8IV77 575 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 PHTF2Q8N3S3 785 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 ASAP3Q8TDY4 903 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 SLC35C1Q96A29 364 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 SAAL1Q96ER3 474 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 DRC1Q96MC2 740 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 POLR3FQ9H1D9 316 aaPredicted RBP6.81□□□□□ -1.32
CHD9-217ENST00000565832 LZTFL1Q9NQ48 299 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 DMAC2Q9NW81 257 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 FLRT1Q9NZU1 646 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 TBX20Q9UMR3 447 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 IVNS1ABPQ9Y6Y0 642 aa6.81□□□□□ -1.32
CHD9-217ENST00000565832 IGSF9BQ9UPX0 1349 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 ZBTB42B2RXF5 422 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 EXOC3O60645 756 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 DGAT1O75907 488 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
CHD9-217ENST00000565832 CNGA1P29973 690 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 GCLCP48506 637 aaPredicted RBP6.8□□□□□ -1.32
CHD9-217ENST00000565832 POLGP54098 1239 aaPredicted RBP6.8□□□□□ -1.32
CHD9-217ENST00000565832 MARSP56192 900 aaKnown RBP6.8□□□□□ -1.32
CHD9-217ENST00000565832 CHMP4BP1P59074 171 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 POLR2FP61218 127 aaKnown RBP6.8□□□□□ -1.32
CHD9-217ENST00000565832 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 ARID5AQ03989 594 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 EMC2Q15006 297 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 ENOX2Q16206 610 aaKnown RBP6.8□□□□□ -1.32
CHD9-217ENST00000565832 CCL14Q16627 93 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 CBWD6Q4V339 395 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 CBWD3Q5JTY5 395 aa6.8□□□□□ -1.32
CHD9-217ENST00000565832 CBWD5Q5RIA9 395 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms