RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 PIAS3Q9Y6X2 628 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 KNL1Q8NG31 2342 aa12.46□□□□□ -0.41
HDGFL3-204ENST00000563790 PLXND1Q9Y4D7 1925 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 MYO16Q9Y6X6 1858 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 NOP56O00567 594 aaKnown RBP12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 MYBP10242 640 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 TGFB3P10600 412 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 TMEM62Q0P6H9 643 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 RALBP1Q15311 655 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 CLLU1OSQ5K130 101 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 SLC9C2Q5TAH2 1124 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 FAM49AQ9H0Q0 323 aaPredicted RBP12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 TRPV5Q9NQA5 729 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 STK39Q9UEW8 545 aa12.45□□□□□ -0.42
HDGFL3-204ENST00000563790 PLIN4Q96Q06 1357 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 PTPRCP08575 1304 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 TCRBV5S4A2TA0A5A2 114 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 C1RP00736 705 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 NR3C2P08235 984 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 KARSQ15046 597 aaKnown RBP12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 GRIK4Q16099 956 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 TNNI3KQ59H18 835 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 WDR44Q5JSH3 913 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 DGKKQ5KSL6 1271 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 SYTL5Q8TDW5 730 aaPredicted RBP12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 MRPL9Q9BYD2 267 aaKnown RBP12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 MRPL17Q9NRX2 175 aaKnown RBP12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 APOBEC2Q9Y235 224 aaKnown RBP12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 FPGT-TNNI3KV9GXZ4 949 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 KIAA1549LQ6ZVL6 1849 aa12.44□□□□□ -0.42
HDGFL3-204ENST00000563790 WDR19Q8NEZ3 1342 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 CLEC18AA5D8T8 446 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 TEX28O15482 410 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 RRP8O43159 456 aaKnown RBP12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 EXTL3O43909 919 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 ENGP17813 658 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 PKDCCQ504Y2 493 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 AGMOQ6ZNB7 445 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 GRASPQ7Z6J2 395 aaPredicted RBP12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 TMC8Q8IU68 726 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 HDDC3Q8N4P3 179 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 CLEC18CQ8NCF0 446 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 ZNF768Q9H5H4 540 aaKnown RBP12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 BRD9Q9H8M2 597 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
HDGFL3-204ENST00000563790 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 RPS6KA5O75582 802 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 EIF2AK2P19525 551 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 CCNE1P24864 410 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 MLLT6P55198 1093 aaPredicted RBP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 DSC3Q14574 896 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 TRIM61Q5EBN2 209 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 ODR4Q5SWX8 454 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 CYP2U1Q7Z449 544 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 IRF7Q92985 503 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 NUSAP1Q9BXS6 441 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 KIAA1522Q9P206 1035 aaPredicted RBP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 MAN2B2Q9Y2E5 1009 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 NID2Q14112 1375 aa12.42□□□□□ -0.42
HDGFL3-204ENST00000563790 E9PAM4 449 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 DCLK1O15075 740 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 SPATA31D3P0C874 917 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 CD59P13987 128 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 SLC16A2P36021 539 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 CXADRP78310 365 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 NTHL1P78549 312 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 KRT76Q01546 638 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 MTX1Q13505 466 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 ARHGEF16Q5VV41 709 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 PMS2CLQ68D20 193 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 C1orf228Q6PIY5 440 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 SPATA31D4Q6ZUB0 917 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 SLCO6A1Q86UG4 719 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 MAP4K3Q8IVH8 894 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 ITFG1Q8TB96 612 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 ELSPBP1Q96BH3 223 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 RPS6KC1Q96S38 1066 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 KIF2CQ99661 725 aa12.41□□□□□ -0.42
HDGFL3-204ENST00000563790 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms