RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 POMGNT1Q8WZA1 660 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 VTNP04004 478 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 C1QTNF8P60827 252 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 NKX3-2P78367 333 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 CXCL17Q6UXB2 119 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 PTCH2Q9Y6C5 1203 aa24■■□□□ 1.43
LINC01960-201ENST00000563759 ITIH6Q6UXX5 1313 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 PHKA2P46019 1235 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 MAPK6Q16659 721 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 TCERG1LQ5VWI1 586 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 SLC39A4Q6P5W5 647 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 SCLT1Q96NL6 688 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 PPP1R16BQ96T49 567 aa23.99■■□□□ 1.43
LINC01960-201ENST00000563759 A0A1W2PQC6 194 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 ADSSP30520 456 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 PPP2R3AQ06190 1150 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 CCDC113Q9H0I3 377 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 FAM49AQ9H0Q0 323 aaPredicted RBP23.98■■□□□ 1.43
LINC01960-201ENST00000563759 C17orf102A2RUQ5 167 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 INO80B-WBP1J3KQ70 363 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 PIGRP01833 764 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 PRKCBP05771 671 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 RDH13Q8NBN7 331 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 NLRP7Q8WX94 980 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 INO80BQ9C086 356 aaPredicted RBP23.98■■□□□ 1.43
LINC01960-201ENST00000563759 HMX1Q9NP08 348 aaPredicted RBP23.98■■□□□ 1.43
LINC01960-201ENST00000563759 HDAC6Q9UBN7 1215 aa23.98■■□□□ 1.43
LINC01960-201ENST00000563759 MBLAC1A4D2B0 266 aaPredicted RBP23.97■■□□□ 1.43
LINC01960-201ENST00000563759 MSCO60682 206 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 GNAT1P11488 350 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 CYP2C9P11712 490 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 GARTP22102 1010 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 CST5P28325 142 aaPredicted RBP23.97■■□□□ 1.43
LINC01960-201ENST00000563759 PTENP60484 403 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 CCDC150Q8NCX0 1101 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 SAAL1Q96ER3 474 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 PCMTD1Q96MG8 357 aaPredicted RBP23.97■■□□□ 1.43
LINC01960-201ENST00000563759 MRPL4Q9BYD3 311 aaKnown RBP23.97■■□□□ 1.43
LINC01960-201ENST00000563759 NFKBIZQ9BYH8 718 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 ANKFY1Q9P2R3 1169 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 USP20Q9Y2K6 914 aa23.97■■□□□ 1.43
LINC01960-201ENST00000563759 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.97■■□□□ 1.43
LINC01960-201ENST00000563759 A0A087WZ62 844 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 ASGR1P07306 291 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 MATR3P43243 847 aaKnown RBP eCLIP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 POU5F1BQ06416 359 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 SYCP1Q15431 976 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 RNF180Q86T96 592 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 PPFIBP1Q86W92 1011 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 KIAA0319LQ8IZA0 1049 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 FDXACB1Q9BRP7 624 aaPredicted RBP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 TARS2Q9BW92 718 aaKnown RBP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 WBP1LQ9NX94 342 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 SMIM35A0A1B0GVV1 85 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 GOLGA8IPA6NC78 632 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 GOLGA8JA6NMD2 632 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 TPM1P09493 284 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 KRT13P13646 458 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 SFPQP23246 707 aaKnown RBP eCLIP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 KCNH2Q12809 1159 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 TBX2Q13207 712 aaPredicted RBP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 KCNA10Q16322 511 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 INTS8Q75QN2 995 aaKnown RBP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 PCSK9Q8NBP7 692 aaKnown RBP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 KLHDC9Q8NEP7 349 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 BORCS6Q96GS4 357 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 ZNF830Q96NB3 372 aaPredicted RBP23.96■■□□□ 1.43
LINC01960-201ENST00000563759 ERGIC2Q96RQ1 377 aa23.96■■□□□ 1.43
LINC01960-201ENST00000563759 AFPP02771 609 aaKnown RBP23.95■■□□□ 1.42
LINC01960-201ENST00000563759 EDN1P05305 212 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 ADAM17P78536 824 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 MBTD1Q05BQ5 628 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 BFSP1Q12934 665 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 TRIM14Q14142 442 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 SNRNP35Q16560 246 aaKnown RBP23.95■■□□□ 1.42
LINC01960-201ENST00000563759 SLFN12LQ6IEE8 588 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 ZPBP2Q6X784 338 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 SLC35C1Q96A29 364 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 IFT122Q9HBG6 1241 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 BRCA2P51587 3418 aa23.95■■□□□ 1.42
LINC01960-201ENST00000563759 DNAH12Q6ZR08 3092 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 TREHO43280 583 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 GPC3P51654 580 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 NLRP11P59045 1033 aaKnown RBP23.94■■□□□ 1.42
LINC01960-201ENST00000563759 HIC1Q14526 733 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 ARID5BQ14865 1188 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 NBPF20Q3BBV1 942 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 ZSWIM2Q8NEG5 633 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.94■■□□□ 1.42
LINC01960-201ENST00000563759 MAPK13O15264 365 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 TMEM132AQ24JP5 1023 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 FAM47CQ5HY64 1035 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 RUFY4Q6ZNE9 571 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 ZNF410Q86VK4 478 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 GPD1LQ8N335 351 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 SH3TC2Q8TF17 1288 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 MINDY3Q9H8M7 445 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 PRMT7Q9NVM4 692 aaPredicted RBP23.94■■□□□ 1.42
LINC01960-201ENST00000563759 STYXL1Q9Y6J8 313 aa23.94■■□□□ 1.42
LINC01960-201ENST00000563759 KIAA0391O15091 583 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms