RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 PIGOQ8TEQ8 1089 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ZNF558Q96NG5 402 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MTMR9Q96QG7 549 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 NACC1Q96RE7 527 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 TRIM6Q9C030 488 aaPredicted RBP10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 DHX33Q9H6R0 707 aaKnown RBP10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 TUFT1Q9NNX1 390 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ENTPD7Q9NQZ7 604 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 SMC3Q9UQE7 1217 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 INPP5FQ9Y2H2 1132 aa10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ARID2Q68CP9 1835 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 KIAA1671Q9BY89 1806 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ARHGEF35A5YM69 484 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 H3BQ06 376 aaPredicted RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ZBTB39O15060 712 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 SRGAP2BP0DMP2 458 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 BMP1P13497 986 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CCT6AP40227 531 aaKnown RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 NDUFV1P49821 464 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 UBE3AQ05086 875 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CAMK2BQ13554 666 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 MAEAQ7L5Y9 396 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 RBM23Q86U06 439 aaKnown RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 FERMT3Q86UX7 667 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 HACE1Q8IYU2 909 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CRIPAKQ8N1N5 446 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 RSPH1Q8WYR4 309 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PABPC5Q96DU9 382 aaKnown RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TMX3Q96JJ7 454 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 NECAB3Q96P71 396 aaPredicted RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CEP89Q96ST8 783 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 HSD17B14Q9BPX1 270 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TMEM60Q9H2L4 133 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TLE6Q9H808 572 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TLR9Q9NR96 1032 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 AGPAT5Q9NUQ2 364 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 FAM105AQ9NUU6 356 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LRWD1Q9UFC0 647 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 XIRP2A4UGR9 3374 aa10.33□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TCF20Q9UGU0 1960 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 FNDC1Q4ZHG4 1894 aaPredicted RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 A0A087WWV3 80 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 FSD2A1L4K1 749 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LRRIQ4A6NIV6 560 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 WNT7AO00755 349 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LYPLA2O95372 231 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LINC00271P0C7V0 271 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 XRCC6P12956 609 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 GJB2P29033 226 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 NRIP1P48552 1158 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 RARRES1P49788 294 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 NBR1Q14596 966 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PCBP1Q15365 356 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CLUL1Q15846 466 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LEXMQ3ZCV2 418 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PDE12Q6L8Q7 609 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 NOTUMQ6P988 496 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 KCNT2Q6UVM3 1135 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 DTHD1Q6ZMT9 781 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CATSPER3Q86XQ3 398 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ZBTB8OSQ8IWT0 167 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 MCPH1Q8NEM0 835 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 SPPL3Q8TCT6 385 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LPPQ93052 612 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TMEM169Q96HH4 297 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CASD1Q96PB1 797 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TCF25Q9BQ70 676 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 POLR3CQ9BUI4 534 aaPredicted RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 GBP3Q9H0R5 595 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 POLR3FQ9H1D9 316 aaPredicted RBP10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 SPG21Q9NZD8 308 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PCDHB2Q9Y5E7 798 aa10.32□□□□□ -0.76
CHRFAM7A-204ENST00000562729 VCANP13611 3396 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CARNS1A5YM72 827 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LAD1O00515 517 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 ITGA4P13612 1032 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 LIG1P18858 919 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 U2AF2P26368 475 aaKnown RBP eCLIP10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 AXLP30530 894 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PBX3P40426 434 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 HYAL1Q12794 435 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PTGDRQ13258 359 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 RILPL1Q5EBL4 403 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CLLU1OSQ5K130 101 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 PLPP4Q5VZY2 271 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 KRT79Q5XKE5 535 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 TMC7Q7Z402 723 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 MRPS27Q92552 414 aaKnown RBP10.31□□□□□ -0.76
CHRFAM7A-204ENST00000562729 IFT74Q96LB3 600 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms