RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MYH9P35579 1960 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 A0A1W2PQJ5 194 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 FAM155AB1AL88 458 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 CETN3O15182 167 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 EPHB6O15197 1021 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 SLC16A3O15427 465 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 ARHGAP6O43182 974 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 CALUO43852 315 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 USO1O60763 962 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 DKC1O60832 514 aaKnown RBP eCLIP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 AKAP3O75969 853 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 NOL4O94818 638 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 HSPA1AP0DMV8 641 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 HSPA1BP0DMV9 641 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 SNRPBP14678 240 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 RFX1P22670 979 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 NR2F2P24468 414 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 HNRNPH3P31942 346 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 CASP4P49662 377 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 RTP1P59025 263 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 PRKCEQ02156 737 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 TBC1D8BQ0IIM8 1120 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 SREBF2Q12772 1141 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 ADAM9Q13443 819 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 ALCAMQ13740 583 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 MYBPC2Q14324 1141 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 NEDD9Q14511 834 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 KCTD2Q14681 263 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 MEA1Q16626 185 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 XKR9Q5GH70 373 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 XKR3Q5GH77 459 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 ODR4Q5SWX8 454 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 CELF3Q5SZQ8 465 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 TMEM63BQ5T3F8 832 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 TAPT1Q6NXT6 567 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 MIS18BP1Q6P0N0 1132 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 WDR59Q6PJI9 974 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 METTL7BQ6UX53 244 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 RAD9BQ6WBX8 426 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 DPH6Q7L8W6 267 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 PPFIBP1Q86W92 1011 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 KSR1Q8IVT5 923 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 FAM178BQ8IXR5 827 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 C12orf56Q8IXR9 622 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 TMEM161BQ8NDZ6 487 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 PPP1R13BQ96KQ4 1090 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 GPR20Q99678 358 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 BAG1Q99933 345 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 DHX33Q9H6R0 707 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 AGPAT3Q9NRZ7 376 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 ABHD10Q9NUJ1 306 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 DIS3Q9Y2L1 958 aaKnown RBP7.17□□□□□ -1.26
CAPN3-210ENST00000561817 SIP14410 1827 aa7.17□□□□□ -1.26
CAPN3-210ENST00000561817 MANSC4A6NHS7 340 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-210ENST00000561817 ZBTB42B2RXF5 422 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 IGF2BP3O00425 579 aaKnown RBP eCLIP7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CLIC2O15247 247 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 SIAH2O43255 324 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 STRNO43815 780 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 SORBS3O60504 671 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 GGPS1O95749 300 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 IGHA2P01877 340 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 ADORA2AP29274 412 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 KRT9P35527 623 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 NPTX2P47972 431 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 SOX10P56693 466 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 SH3BP2P78314 561 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CCNA1P78396 465 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 GRB14Q14449 540 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 MTF1Q14872 753 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 LY6KQ17RY6 165 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 FAM110CQ1W6H9 321 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CCDC181Q5TID7 509 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 KCNV1Q6PIU1 500 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 TOGARAM2Q6ZUX3 1019 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 TAS1R3Q7RTX0 852 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CNGA4Q8IV77 575 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 FBXO16Q8IX29 292 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 ANKRD13CQ8N6S4 541 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 PRR7Q8TB68 274 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CPLX3Q8WVH0 158 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 BAP1Q92560 729 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 KIFAP3Q92845 792 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 HHIPL1Q96JK4 782 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CEP170P1Q96L14 293 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 MKNK1Q9BUB5 465 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 NUP58Q9BVL2 599 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 NAA15Q9BXJ9 866 aaKnown RBP7.16□□□□□ -1.26
CAPN3-210ENST00000561817 EDEM3Q9BZQ6 932 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 ZCCHC17Q9NP64 241 aaKnown RBP7.16□□□□□ -1.26
CAPN3-210ENST00000561817 ZNF302Q9NR11 478 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 CYP26B1Q9NR63 512 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 PDGFCQ9NRA1 345 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 AGPAT5Q9NUQ2 364 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 LARSQ9P2J5 1176 aaKnown RBP7.16□□□□□ -1.26
CAPN3-210ENST00000561817 TCEAL9Q9UHQ7 104 aa7.16□□□□□ -1.26
CAPN3-210ENST00000561817 FAM184BQ9ULE4 1060 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms