RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PEX11AO75192 247 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 GM2AP17900 193 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 RRP1BQ14684 758 aaKnown RBP17.72■□□□□ 0.43
TPM1-228ENST00000560975 ZNF449Q6P9G9 518 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 LMNTD2Q8IXW0 634 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 ART4Q93070 314 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 RUNDC3BQ96NL0 473 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 NUDCD1Q96RS6 583 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 SYT15Q9BQS2 421 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 REEP2Q9BRK0 252 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 BCL9O00512 1426 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 SYNGAP1Q96PV0 1343 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 SFI1A8K8P3 1242 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 CALB2P22676 271 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 CHKAP35790 457 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 CALCOCO2Q13137 446 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 KYNUQ16719 465 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 SRRM1Q8IYB3 904 aaKnown RBP17.72■□□□□ 0.43
TPM1-228ENST00000560975 CYP4X1Q8N118 509 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 UBL4BQ8N7F7 174 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 PIGOQ8TEQ8 1089 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 LBHD1Q9BQE6 289 aaPredicted RBP17.72■□□□□ 0.43
TPM1-228ENST00000560975 PCYOX1Q9UHG3 505 aa17.72■□□□□ 0.43
TPM1-228ENST00000560975 ATAD5Q96QE3 1844 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 ANKRD33BA6NCL7 494 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 GCNT3O95395 438 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 LDHBP07195 334 aaKnown RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 SLC12A3P55017 1021 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 GIT2Q14161 759 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 SEL1L2Q5TEA6 688 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 TTC8Q8TAM2 541 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 TEKT4Q8WW24 435 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 PITPNM3Q9BZ71 974 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 ROPN1BQ9BZX4 212 aaPredicted RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 ROPN1Q9HAT0 212 aaPredicted RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.71■□□□□ 0.43
TPM1-228ENST00000560975 DCCP43146 1447 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 TULP1O00294 542 aaPredicted RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 PYGMP11217 842 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 COILP38432 576 aaPredicted RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 SESN3P58005 492 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 TRIP13Q15645 432 aaPredicted RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 TMEM154Q6P9G4 183 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 SUPT20HQ8NEM7 779 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 PWWP2AQ96N64 755 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 MOV10L1Q9BXT6 1211 aaKnown RBP17.71■□□□□ 0.43
TPM1-228ENST00000560975 ZCWPW1Q9H0M4 648 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 RIOX1Q9H6W3 641 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 TXLNGQ9NUQ3 528 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 LRRC42Q9Y546 428 aa17.71■□□□□ 0.43
TPM1-228ENST00000560975 TPBGLP0DKB5 382 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 CTNNA2P26232 953 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 FOXN2P32314 431 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 ZNF746Q6NUN9 644 aaPredicted RBP17.7■□□□□ 0.42
TPM1-228ENST00000560975 LONP2Q86WA8 852 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 FAM13CQ8NE31 585 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 STK32AQ8WU08 396 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 SLC20A1Q8WUM9 679 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 RPS6KC1Q96S38 1066 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 ASTN1O14525 1302 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 ATMINO43313 823 aaPredicted RBP17.7■□□□□ 0.42
TPM1-228ENST00000560975 WFS1O76024 890 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 NEDD1Q8NHV4 660 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 ZSWIM1Q9BR11 485 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 METTL14Q9HCE5 456 aaKnown RBP17.7■□□□□ 0.42
TPM1-228ENST00000560975 AAASQ9NRG9 546 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 CYP39A1Q9NYL5 469 aa17.7■□□□□ 0.42
TPM1-228ENST00000560975 ANKRD62A6NC57 917 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 PDXKO00764 312 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 COMTP21964 271 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 HYIQ5T013 277 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 CWF19L1Q69YN2 538 aaKnown RBP17.69■□□□□ 0.42
TPM1-228ENST00000560975 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 C1orf54Q8WWF1 131 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 BTBD6Q96KE9 485 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 SERPINB12Q96P63 405 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 NKIRAS1Q9NYS0 192 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 ITGB4P16144 1822 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 ENTPD5O75356 428 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 TRIM49P0CI25 452 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 TRIM49CP0CI26 452 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 EPHB2P29323 1055 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 PEX5P50542 639 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 SETDB1Q15047 1291 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 MTFR1Q15390 333 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 TRMT10CQ7L0Y3 403 aaKnown RBP17.69■□□□□ 0.42
TPM1-228ENST00000560975 SPOCK2Q92563 424 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 KIAA1683Q9H0B3 1180 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 ASIC3Q9UHC3 531 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 PPP1R11O60927 126 aaPredicted RBP17.69■□□□□ 0.42
TPM1-228ENST00000560975 DLATP10515 647 aaKnown RBP17.69■□□□□ 0.42
TPM1-228ENST00000560975 CETPP11597 493 aa17.69■□□□□ 0.42
TPM1-228ENST00000560975 TAC1P20366 129 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms