RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 SPECC1LQ69YQ0 1117 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 ARMCX5Q6P1M9 558 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 ZPBP2Q6X784 338 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 ZNF410Q86VK4 478 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 SESTD1Q86VW0 696 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 KSR1Q8IVT5 923 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 NME8Q8N427 588 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 C7orf31Q8N865 590 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 XXYLT1Q8NBI6 393 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 RNF149Q8NC42 400 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 LMBR1Q8WVP7 490 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 IQCDQ96DY2 449 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 BICD1Q96G01 975 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PRIMPOLQ96LW4 560 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 TSEN34Q9BSV6 310 aaKnown RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 CCDC113Q9H0I3 377 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 NDST4Q9H3R1 872 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 KIAA1586Q9HCI6 787 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 SETD4Q9NVD3 440 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PRMT7Q9NVM4 692 aaPredicted RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 TAB2Q9NYJ8 693 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 ARMCX3Q9UH62 379 aaPredicted RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PTPN22Q9Y2R2 807 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 MYH10P35580 1976 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 MYADML2A6NDP7 307 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 ACKR2O00590 384 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 TEX33O43247 280 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 EXOC3O60645 756 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 AKAP3O75969 853 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 PGK1P00558 417 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 ASGR1P07306 291 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 CYP2C9P11712 490 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 LIG4P49917 911 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 CYP2J2P51589 502 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 UBXN1Q04323 297 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 PTPN11Q06124 597 aaPredicted RBP9.41□□□□□ -0.9
TRAF3-209ENST00000560463 TRIM14Q14142 442 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 KCNA10Q16322 511 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 CEP135Q66GS9 1140 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 CCSAPQ6IQ19 270 aaPredicted RBP9.41□□□□□ -0.9
TRAF3-209ENST00000560463 INTS8Q75QN2 995 aaKnown RBP9.41□□□□□ -0.9
TRAF3-209ENST00000560463 TMC6Q7Z403 805 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 SRGAP1Q7Z6B7 1085 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 USP37Q86T82 979 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 FAM186BQ8IYM0 893 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 KIAA0319LQ8IZA0 1049 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 SPC24Q8NBT2 197 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 ARRDC4Q8NCT1 418 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 ERGIC2Q96RQ1 377 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 KIFC3Q9BVG8 833 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 MRPL4Q9BYD3 311 aaKnown RBP9.41□□□□□ -0.9
TRAF3-209ENST00000560463 SEZ6LQ9BYH1 1024 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
TRAF3-209ENST00000560463 FZD8Q9H461 694 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 INTS13Q9NVM9 706 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAF3-209ENST00000560463 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.93e-7■■■□□ 14.7
TRAF3-209ENST00000560463 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 CEP350Q5VT06 3117 aa9.41□□□□□ -0.9
TRAF3-209ENST00000560463 ANKRD63C9JTQ0 380 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 PES1O00541 588 aaKnown RBP9.4□□□□□ -0.9
TRAF3-209ENST00000560463 PRKCBP05771 671 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 TPM1P09493 284 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 KRT13P13646 458 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 ADSSP30520 456 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 CASP4P49662 377 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 GPC3P51654 580 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 NLRP11P59045 1033 aaKnown RBP9.4□□□□□ -0.9
TRAF3-209ENST00000560463 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
TRAF3-209ENST00000560463 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 LHX8Q68G74 356 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 TAF2Q6P1X5 1199 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 SLC39A4Q6P5W5 647 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 CXCL17Q6UXB2 119 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 GPD1LQ8N335 351 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 DNAJC5GQ8N7S2 189 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 BORCS6Q96GS4 357 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 FBXL18Q96ME1 805 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 NLRP4Q96MN2 994 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 NUP58Q9BVL2 599 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 HDAC6Q9UBN7 1215 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
TRAF3-209ENST00000560463 A0A087WZ62 844 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 GTPBP10A4D1E9 387 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 INO80B-WBP1J3KQ70 363 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 CLDN3O15551 220 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 TREHO43280 583 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 STX10O60499 249 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 TOM1L1O75674 476 aa9.39□□□□□ -0.91
TRAF3-209ENST00000560463 AFPP02771 609 aaKnown RBP9.39□□□□□ -0.91
TRAF3-209ENST00000560463 VTNP04004 478 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms