RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 NCAPH2Q6IBW4 605 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 C12orf76Q8N812 135 aaPredicted RBP19.43■□□□□ 0.7
CRTC3-208ENST00000560098 KREMEN2Q8NCW0 462 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 SLC22A17Q8WUG5 538 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 TCP11Q8WWU5 503 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 ZSWIM4Q9H7M6 989 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 RSAD1Q9HA92 442 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 STK39Q9UEW8 545 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 CNTNAP2Q9UHC6 1331 aa19.43■□□□□ 0.7
CRTC3-208ENST00000560098 ASAP2O43150 1006 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 DTNBO60941 627 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 BAG4O95429 457 aaKnown RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 WEE2P0C1S8 567 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 VCPP55072 806 aaKnown RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 SPIRE1Q08AE8 756 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 EMC2Q15006 297 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 PTPN14Q15678 1187 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 XKR9Q5GH70 373 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 EARS2Q5JPH6 523 aaKnown RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 ATAT1Q5SQI0 421 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 UBXN11Q5T124 520 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 KIAA1841Q6NSI8 718 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 SLFN12Q8IYM2 578 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 RNF149Q8NC42 400 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 DYDC2Q96IM9 177 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 KANSL3Q9P2N6 904 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 SORCS3Q9UPU3 1222 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 DDHD2O94830 711 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 CTDNEP1O95476 244 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 AVPR2P30518 371 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 CYP4A11Q02928 519 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 TCF15Q12870 199 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 MTMR3Q13615 1198 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 CTTNQ14247 550 aaKnown RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 KANK3Q6NY19 840 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 FERMT3Q86UX7 667 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 CABP7Q86V35 215 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 PPFIBP1Q86W92 1011 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 UBALD2Q8IYN6 164 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 WASF1Q92558 559 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 FAM193BQ96PV7 902 aaPredicted RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 TMEM175Q9BSA9 504 aa19.42■□□□□ 0.7
CRTC3-208ENST00000560098 ORC3Q9UBD5 711 aaPredicted RBP19.42■□□□□ 0.7
CRTC3-208ENST00000560098 ZBTB39O15060 712 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 ALDH2P05091 517 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 NCLP19338 710 aaKnown RBP19.41■□□□□ 0.7
CRTC3-208ENST00000560098 TPH2Q8IWU9 490 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 TDRD5Q8NAT2 981 aaKnown RBP19.41■□□□□ 0.7
CRTC3-208ENST00000560098 CNNM3Q8NE01 707 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 PHOX2BQ99453 314 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 MTRQ99707 1265 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 EMILIN2Q9BXX0 1053 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 UBN1Q9NPG3 1134 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 DBR1Q9UK59 544 aaKnown RBP19.41■□□□□ 0.7
CRTC3-208ENST00000560098 FAN1Q9Y2M0 1017 aa19.41■□□□□ 0.7
CRTC3-208ENST00000560098 FAM205CA6NFA0 338 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 ERLIN2O94905 339 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 SLITRK3O94933 977 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 BRD1O95696 1058 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 POMCP01189 267 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 KRT2P35908 639 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 NR5A1Q13285 461 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 ANKRD1Q15327 319 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 PCBP1Q15365 356 aaKnown RBP eCLIP19.4■□□□□ 0.7
CRTC3-208ENST00000560098 ZDHHC14Q8IZN3 488 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 KLHL5Q96PQ7 755 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 BRMS1Q9HCU9 246 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 USTQ9Y2C2 406 aa19.4■□□□□ 0.7
CRTC3-208ENST00000560098 ZDBF2Q9HCK1 2354 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 KMT2EQ8IZD2 1858 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 NRP1O14786 923 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 PDGFBP01127 241 aaPredicted RBP19.39■□□□□ 0.69
CRTC3-208ENST00000560098 SSBP05455 408 aaKnown RBP eCLIP19.39■□□□□ 0.69
CRTC3-208ENST00000560098 ITGA4P13612 1032 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 FDPSP14324 419 aaKnown RBP19.39■□□□□ 0.69
CRTC3-208ENST00000560098 AXLP30530 894 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 AK2P54819 239 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 ANAPC15P60006 121 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 MXD4Q14582 209 aaPredicted RBP19.39■□□□□ 0.69
CRTC3-208ENST00000560098 TMC5Q6UXY8 1006 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 PLCD3Q8N3E9 789 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 SMG8Q8ND04 991 aaKnown RBP19.39■□□□□ 0.69
CRTC3-208ENST00000560098 TNFRSF25Q93038 417 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 EIF2AK1Q9BQI3 630 aaKnown RBP19.39■□□□□ 0.69
CRTC3-208ENST00000560098 SFXN1Q9H9B4 322 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 XPNPEP1Q9NQW7 623 aa19.39■□□□□ 0.69
CRTC3-208ENST00000560098 TSPAN1O60635 241 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 LILRB3O75022 631 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 CNPP09543 421 aaKnown RBP19.38■□□□□ 0.69
CRTC3-208ENST00000560098 KLRC2P26717 231 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 CLCN4P51793 760 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 PTENP60484 403 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 NCBP1Q09161 790 aaKnown RBP19.38■□□□□ 0.69
CRTC3-208ENST00000560098 NOTUMQ6P988 496 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 CCDC51Q96ER9 411 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 HSD17B14Q9BPX1 270 aa19.38■□□□□ 0.69
CRTC3-208ENST00000560098 MRPL17Q9NRX2 175 aaKnown RBP19.38■□□□□ 0.69
CRTC3-208ENST00000560098 LIMD1Q9UGP4 676 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms