RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 NAA30Q147X3 362 aaPredicted RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 SLC9A9Q8IVB4 645 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 FAM186BQ8IYM0 893 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 PPTC7Q8NI37 304 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 GPR20Q99678 358 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 AGPAT3Q9NRZ7 376 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 DMAC2Q9NW81 257 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 FRMD4BQ9Y2L6 1034 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 GTPBP10A4D1E9 387 aaKnown RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 AKR1B10O60218 316 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 MYCNP04198 464 aaPredicted RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 SERPING1P05155 500 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 C6orf222P0C671 652 aaPredicted RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 EIF4A3P38919 411 aaKnown RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 KIF5AQ12840 1032 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 ELF2Q15723 593 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 EXOC3L4Q17RC7 722 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 DCAF17Q5H9S7 520 aaPredicted RBP19.41■□□□□ 0.7
SNX1-208ENST00000559844 OTUD6AQ7L8S5 288 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 UBXN4Q92575 508 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 ATP6V0A1Q93050 837 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 CRACR2AQ9BSW2 395 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 GANQ9H2C0 597 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 ST6GALNAC4Q9H4F1 302 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 SPC25Q9HBM1 224 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 NLRC4Q9NPP4 1024 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 CDC23Q9UJX2 597 aa19.41■□□□□ 0.7
SNX1-208ENST00000559844 ABL1P00519 1130 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 PSAPP07602 524 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 CASP4P49662 377 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 GJA9P57773 515 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 BEX3Q00994 111 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 UGCGQ16739 394 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 TCERG1LQ5VWI1 586 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 LHX8Q68G74 356 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 SLC35C1Q96A29 364 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 BORCS6Q96GS4 357 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 DEFB118Q96PH6 123 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 ACCSQ96QU6 501 aa19.4■□□□□ 0.7
SNX1-208ENST00000559844 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNX1-208ENST00000559844 V9GYY5 206 aaPredicted RBP19.4■□□□□ 0.7
SNX1-208ENST00000559844 GSTTP1A0A1W2PQM5 241 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 TADA3O75528 432 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 MMP3P08254 477 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 TCF7P36402 384 aaPredicted RBP19.39■□□□□ 0.7
SNX1-208ENST00000559844 SNRPFP62306 86 aaKnown RBP19.39■□□□□ 0.7
SNX1-208ENST00000559844 FSCN1Q16658 493 aaKnown RBP19.39■□□□□ 0.7
SNX1-208ENST00000559844 XKR9Q5GH70 373 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 TMEM174Q8WUU8 243 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 SEPT1Q8WYJ6 367 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 UPF3AQ9H1J1 476 aaKnown RBP19.39■□□□□ 0.7
SNX1-208ENST00000559844 MYO6Q9UM54 1294 aa19.39■□□□□ 0.7
SNX1-208ENST00000559844 KIAA0100Q14667 2235 aaKnown RBP19.39■□□□□ 0.69
SNX1-208ENST00000559844 MYADML2A6NDP7 307 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 BACH1O14867 736 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 ADAMTS4O75173 837 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 PLEKP08567 350 aaPredicted RBP19.39■□□□□ 0.69
SNX1-208ENST00000559844 CPT1AP50416 773 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 PPP2R5AQ15172 486 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 BRDTQ58F21 947 aaPredicted RBP19.39■□□□□ 0.69
SNX1-208ENST00000559844 MAEAQ7L5Y9 396 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 CEP112Q8N8E3 955 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 IFIH1Q9BYX4 1025 aaKnown RBP19.39■□□□□ 0.69
SNX1-208ENST00000559844 AIPL1Q9NZN9 384 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 PCDHA13Q9Y5I0 950 aa19.39■□□□□ 0.69
SNX1-208ENST00000559844 MYH11P35749 1972 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 A6NJR5 290 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 ERCC6LQ2NKX8 1250 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 TDRD12Q587J7 1177 aaKnown RBP19.38■□□□□ 0.69
SNX1-208ENST00000559844 GNASQ5JWF2 1037 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 HGSNATQ68CP4 663 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 MIS18BP1Q6P0N0 1132 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 ABHD15Q6UXT9 468 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 KSR1Q8IVT5 923 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 C12orf56Q8IXR9 622 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 LRRN4CLQ8ND94 238 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 LUC7LQ9NQ29 371 aaKnown RBP19.38■□□□□ 0.69
SNX1-208ENST00000559844 TRIM10Q9UDY6 481 aa19.38■□□□□ 0.69
SNX1-208ENST00000559844 ATG7O95352 703 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 SUPT20HL2P0C7V6 817 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 PON1P27169 355 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 TUBB4BP68371 445 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 CYP27A1Q02318 531 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 ASIC2Q16515 512 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 DGKDQ16760 1214 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 ASTE1Q2TB18 679 aaPredicted RBP19.37■□□□□ 0.69
SNX1-208ENST00000559844 KLHDC7AQ5VTJ3 777 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 HVCN1Q96D96 273 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 GABBR1Q9UBS5 961 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 RBAK-RBAKDNI3L0D1 243 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 ZNF263O14978 683 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 PPFIA4O75335 1185 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 NCKAP1LP55160 1127 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 GTF2BQ00403 316 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 RAPGEF1Q13905 1077 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 WHAMMP3Q1A5X7 153 aa19.37■□□□□ 0.69
SNX1-208ENST00000559844 UTP14CQ5TAP6 766 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms