RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
SPG11-219ENST00000559822 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
SPG11-219ENST00000559822 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
SPG11-219ENST00000559822 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
SPG11-219ENST00000559822 HCFC2Q9Y5Z7 792 aa13.66□□□□□ -0.22
SPG11-219ENST00000559822 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
SPG11-219ENST00000559822 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.65□□□□□ -0.22
SPG11-219ENST00000559822 JAK2O60674 1132 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 CXCL14O95715 111 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 GALTP07902 379 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPG11-219ENST00000559822 TXKP42681 527 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 PTENP60484 403 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 ITIH3Q06033 890 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.22
SPG11-219ENST00000559822 NOTUMQ6P988 496 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 HACE1Q8IYU2 909 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 EDAQ92838 391 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 RPGRIP1Q96KN7 1286 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 NECTIN4Q96NY8 510 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 LLPHQ9BRT6 129 aaKnown RBP13.65□□□□□ -0.22
SPG11-219ENST00000559822 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 S1PR5Q9H228 398 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 DZANK1Q9NVP4 752 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 LIMCH1Q9UPQ0 1083 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 NR2E1Q9Y466 385 aa13.65□□□□□ -0.22
SPG11-219ENST00000559822 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 ZBTB39O15060 712 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
SPG11-219ENST00000559822 ALDH2P05091 517 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 CTSAP10619 480 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 ITGA4P13612 1032 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 NCLP19338 710 aaKnown RBP13.64□□□□□ -0.23
SPG11-219ENST00000559822 HOXA11P31270 313 aaPredicted RBP13.64□□□□□ -0.23
SPG11-219ENST00000559822 FOSBP53539 338 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 SYCE2Q6PIF2 218 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 PPFIBP1Q86W92 1011 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
SPG11-219ENST00000559822 ERMNQ8TAM6 284 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 NFKBIZQ9BYH8 718 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 XPNPEP1Q9NQW7 623 aa13.64□□□□□ -0.23
SPG11-219ENST00000559822 TSPAN1O60635 241 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 MTHFRP42898 656 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 SLC11A1P49279 550 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 RARRES1P49788 294 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 HMGN5P82970 282 aaKnown RBP13.63□□□□□ -0.23
SPG11-219ENST00000559822 GNL2Q13823 731 aaKnown RBP13.63□□□□□ -0.23
SPG11-219ENST00000559822 UBXN11Q5T124 520 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 TMEM173Q86WV6 379 aaPredicted RBP13.63□□□□□ -0.23
SPG11-219ENST00000559822 MCPH1Q8NEM0 835 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 ZSCAN31Q96LW9 406 aaPredicted RBP13.63□□□□□ -0.23
SPG11-219ENST00000559822 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
SPG11-219ENST00000559822 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 DNAJB4Q9UDY4 337 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
SPG11-219ENST00000559822 POTEMA6NI47 508 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 NR1I2O75469 434 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 MCM7P33993 719 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 ARL2P36404 184 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 ZXDAP98168 799 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 CAPSQ13938 189 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 TRIM67Q6ZTA4 783 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 HFE2Q6ZVN8 426 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 BMP8AQ7Z5Y6 402 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 NACC1Q96RE7 527 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 APOL5Q9BWW9 433 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 CSRNP2Q9H175 543 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 FOXP1Q9H334 677 aaPredicted RBP13.62□□□□□ -0.23
SPG11-219ENST00000559822 SH2B1Q9NRF2 756 aaPredicted RBP13.62□□□□□ -0.23
SPG11-219ENST00000559822 SSX2IPQ9Y2D8 614 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 IPPQ9Y573 584 aa13.62□□□□□ -0.23
SPG11-219ENST00000559822 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 INPPL1O15357 1258 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 DDHD2O94830 711 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 POMCP01189 267 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 CENPBP07199 599 aaPredicted RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 OR52Z1P0C646 297 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 GLRA2P23416 452 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 RBM25P49756 843 aaKnown RBP13.61□□□□□ -0.23
SPG11-219ENST00000559822 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 MBTD1Q05BQ5 628 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 ELMSAN1Q6PJG2 1045 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 ZNF280BQ86YH2 543 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
SPG11-219ENST00000559822 SUGP1Q8IWZ8 645 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms