RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 F8VZ95 297 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 K7ERI5 159 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 HGSNATQ68CP4 663 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 JAMLQ86YT9 394 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 GRK7Q8WTQ7 553 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 NXF1Q9UBU9 619 aaKnown RBP16.59■□□□□ 0.25
AP4E1-202ENST00000558439 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
AP4E1-202ENST00000558439 SLMAPQ14BN4 828 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 CPA5Q8WXQ8 436 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 RUBCNQ92622 972 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 ADAM22Q9P0K1 906 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
AP4E1-202ENST00000558439 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
AP4E1-202ENST00000558439 NAA25Q14CX7 972 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 TMED2Q15363 201 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 TBC1D22BQ9NU19 505 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 NOL4O94818 638 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
AP4E1-202ENST00000558439 GABPAQ06546 454 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 PPP2R5AQ15172 486 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 C6orf118Q5T5N4 469 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 VTI1AQ96AJ9 217 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 KCTD10Q9H3F6 313 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
AP4E1-202ENST00000558439 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.25
AP4E1-202ENST00000558439 CHRNA3P32297 505 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 BPIFB4P59827 614 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 ALCAMQ13740 583 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 SNRNP35Q16560 246 aaKnown RBP16.58■□□□□ 0.25
AP4E1-202ENST00000558439 TTMPQ5BVD1 217 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 CCDC63Q8NA47 563 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 FBXL13Q8NEE6 735 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.25
AP4E1-202ENST00000558439 KLHL11Q9NVR0 708 aa16.58■□□□□ 0.25
AP4E1-202ENST00000558439 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 SGPL1O95470 568 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 SRGAP2CP0DJJ0 459 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 MARK3P27448 753 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 ACOT2P49753 483 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 PSMC5P62195 406 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 SLC29A2Q14542 456 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 Q4G0T1 1027 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 MOXD1Q6UVY6 613 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 TBC1D1Q86TI0 1168 aaPredicted RBP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 ERP44Q9BS26 406 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 KLHL14Q9P2G3 628 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 SGK1O00141 431 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 SPATA31C1P0DKV0 1188 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 ACTN3Q08043 901 aaPredicted RBP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 RASA3Q14644 834 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 C15orf52Q6ZUT6 534 aaKnown RBP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 CALR3Q96L12 384 aaKnown RBP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 PPP1R16BQ96T49 567 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 GANQ9H2C0 597 aa16.58■□□□□ 0.24
AP4E1-202ENST00000558439 DIS3Q9Y2L1 958 aaKnown RBP16.58■□□□□ 0.24
AP4E1-202ENST00000558439 LRRD1A4D1F6 860 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 NFIBO00712 420 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 RTN2O75298 545 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 SCP2P22307 547 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 ALDH3A1P30838 453 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 LAMA4Q16363 1823 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 GBP1P32455 592 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 IGBP1P78318 339 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 LACTBP83111 547 aaPredicted RBP16.57■□□□□ 0.24
AP4E1-202ENST00000558439 BAATQ14032 418 aaPredicted RBP16.57■□□□□ 0.24
AP4E1-202ENST00000558439 CCDC6Q16204 474 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 PTGISQ16647 500 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 FAM47EQ6ZV65 393 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 NCAPG2Q86XI2 1143 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
AP4E1-202ENST00000558439 FBXO25Q8TCJ0 367 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 TAAR1Q96RJ0 339 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 MKNK1Q9BUB5 465 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 PCDHGC5Q9Y5F6 944 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 PHRF1Q9P1Y6 1649 aaKnown RBP16.57■□□□□ 0.24
AP4E1-202ENST00000558439 RPSAP08865 295 aaKnown RBP16.57■□□□□ 0.24
AP4E1-202ENST00000558439 TMEM191BP0C7N4 346 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 SOX10P56693 466 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 ITIH3Q06033 890 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms