RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PHF2O75151 1096 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PYGLP06737 847 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZCCHC18P0CG32 403 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 HLA-DPA1P20036 260 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 FGFR4P22455 802 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 RGS2P41220 211 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 CLK1P49759 484 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ABCE1P61221 599 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PPIDQ08752 370 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 RASGRF1Q13972 1273 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZBED8Q8IZ13 594 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PNKPQ96T60 521 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 DDX39AO00148 427 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 YWHAHQ04917 246 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 NR1I3Q14994 352 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 BRDTQ58F21 947 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 MRPL1Q9BYD6 325 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 CAAP1Q9H8G2 361 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 TTC37Q6PGP7 1564 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 TPD52L2O43399 206 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 NLRX1Q86UT6 975 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 REXO1L1PQ8IX06 675 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 BBS5Q8N3I7 341 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 STX19Q8N4C7 294 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 NMD3Q96D46 503 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 EYA3Q99504 573 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZC3H12CQ9C0D7 883 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ANAPC7Q9UJX3 599 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 DNAJC12Q9UKB3 198 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 MKL2Q9ULH7 1088 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PTPRTO14522 1441 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRR23D1E9PI22 279 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 LIN7AO14910 233 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 AKAP10O43572 662 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRR23D2P0DMB1 279 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRLRP16471 622 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 PSMC3P17980 439 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 PAMP19021 973 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRCPP42785 496 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 EPS8L2Q9H6S3 715 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 TMBIM4Q9HC24 238 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 SCN3BQ9NY72 215 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 GTSE1Q9NYZ3 720 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 MPP6Q9NZW5 540 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 CORO1CQ9ULV4 474 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 SAC3D1A6NKF1 404 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 NFIBO00712 420 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZNF185O15231 689 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 SLC12A1Q13621 1099 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 RSRC2Q7L4I2 434 aaKnown RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 SFR1Q86XK3 245 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 DPF2Q92785 391 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 VPS11Q9H270 941 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 RAB21Q9UL25 225 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 AURKCQ9UQB9 309 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 UNC13BO14795 1591 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 ASNA1O43681 348 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 CFBP00751 764 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 MYBL1P10243 752 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 MPP4Q96JB8 637 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 KLHL4Q9C0H6 718 aa12.46□□□□□ -0.41
CSPG4P12-201ENST00000558282 SMAPO00193 183 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 ABLIM1O14639 778 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT7P08729 469 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 VCAM1P19320 739 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 RCAN1P53805 252 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 LLGL1Q15334 1064 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRIM69Q86WT6 500 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 CCNYQ8ND76 341 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 RPS6KC1Q96S38 1066 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 SUGCTQ9HAC7 445 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 TET3O43151 1660 aa12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 ZCCHC11Q5TAX3 1644 aaKnown RBP12.46□□□□□ -0.42
CSPG4P12-201ENST00000558282 CCDC195A0A1B0GUA6 201 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 TMEM191CA6NGB0 347 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ATP4AP20648 1035 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 PTPN4P29074 926 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 KRT17Q04695 432 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 TRMT5Q32P41 509 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 XKR9Q5GH70 373 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 FUKQ8N0W3 1084 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 USP33Q8TEY7 942 aa12.45□□□□□ -0.42
CSPG4P12-201ENST00000558282 ARL8AQ96BM9 186 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms