RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 LIMD1Q9UGP4 676 aa11.71□□□□□ -0.53
LYSMD2-203ENST00000558126 DBR1Q9UK59 544 aaKnown RBP11.71□□□□□ -0.53
LYSMD2-203ENST00000558126 MYO10Q9HD67 2058 aa11.71□□□□□ -0.54
LYSMD2-203ENST00000558126 IGKV6-21A0A0C4DH24 114 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 CCDC196A0A1B0GTZ2 297 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 ZNF862O60290 1169 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 SP100P23497 879 aaPredicted RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 GNA11P29992 359 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 SFNP31947 248 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 PHKA2P46019 1235 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 TARBP2Q15633 366 aaKnown RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 RARS2Q5T160 578 aaKnown RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 JAKMIP3Q5VZ66 844 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 ZNF787Q6DD87 383 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 C15orf39Q6ZRI6 1047 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 OTOP3Q7RTS5 596 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 GPR149Q86SP6 731 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 CCDC12Q8WUD4 166 aaPredicted RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 LENG9Q96B70 501 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 ACSF2Q96CM8 615 aaPredicted RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 PPP1R16BQ96T49 567 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 ESYT1Q9BSJ8 1104 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 INO80BQ9C086 356 aaPredicted RBP11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 MFSD1Q9H3U5 465 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 SFXN1Q9H9B4 322 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 CDH22Q9UJ99 828 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 BRPF3Q9ULD4 1205 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
LYSMD2-203ENST00000558126 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 C1RP00736 705 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 GALTP07902 379 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 NPR3P17342 541 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 METAP2P50579 478 aaKnown RBP eCLIP11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 USP11P51784 963 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 JAK3P52333 1124 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 TBC1D8BQ0IIM8 1120 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 TDGQ13569 410 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 PRR16Q569H4 304 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 CWF19L1Q69YN2 538 aaKnown RBP11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 CABP7Q86V35 215 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 ZNF410Q86VK4 478 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 CCDC105Q8IYK2 499 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 LRRC71Q8N4P6 559 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 TMEM87AQ8NBN3 555 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 BICD2Q8TD16 824 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 CEP89Q96ST8 783 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 DISC1Q9NRI5 854 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 IGSF9Q9P2J2 1179 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 DUSP12Q9UNI6 340 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 CACNA1AO00555 2505 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 PLXNA3P51805 1871 aa11.69□□□□□ -0.54
LYSMD2-203ENST00000558126 EP300Q09472 2414 aaPredicted RBP11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 LILRB3O75022 631 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 OFD1O75665 1012 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 PAPLNO95428 1278 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 ASGR2P07307 311 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 HMGB1P09429 215 aaKnown RBP11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 EPCAMP16422 314 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 SFPQP23246 707 aaKnown RBP eCLIP11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 CDC27P30260 824 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 ID4P47928 161 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 RAB27AP51159 221 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 PRKCEQ02156 737 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 NOMO2Q5JPE7 1267 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 GLB1LQ6UWU2 654 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 CCDC149Q6ZUS6 474 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 C12orf76Q8N812 135 aaPredicted RBP11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 CMASQ8NFW8 434 aaPredicted RBP11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 NXPE3Q969Y0 559 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 EMILIN2Q9BXX0 1053 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 NRDE2Q9H7Z3 1164 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 TBC1D13Q9NVG8 400 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 WNT16Q9UBV4 365 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 DPP7Q9UHL4 492 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
LYSMD2-203ENST00000558126 EVPLQ92817 2033 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 GOLGA8AA7E2F4 631 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 NT5C1B-RDH14C9J2C7 533 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 MSH4O15457 936 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 PRPF3O43395 683 aaKnown RBP11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 ZC3H11AO75152 810 aaKnown RBP eCLIP11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 CLCN1P35523 988 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 DNM2P50570 870 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 KRT32Q14532 448 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 XKR3Q5GH77 459 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 B3GNT9Q6UX72 402 aa11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 MRPL10Q7Z7H8 261 aaKnown RBP11.67□□□□□ -0.54
LYSMD2-203ENST00000558126 TMEM173Q86WV6 379 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms