RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ZC3H14Q6PJT7 736 aaKnown RBP20.6■□□□□ 0.89
ABCD4-228ENST00000557588 CCDC136Q96JN2 1154 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 NLRP4Q96MN2 994 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 RPS6KC1Q96S38 1066 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 RSAD1Q9HA92 442 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 DLGAP2Q9P1A6 1054 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 DPP7Q9UHL4 492 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 CA14Q9ULX7 337 aa20.6■□□□□ 0.89
ABCD4-228ENST00000557588 INPPL1O15357 1258 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 PSMD10O75832 226 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 RFX1P22670 979 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 USP11P51784 963 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 AFF1P51825 1210 aaKnown RBP20.59■□□□□ 0.89
ABCD4-228ENST00000557588 ADCK5Q3MIX3 580 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 TSGA10IPQ3SY00 556 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 PHLDB3Q6NSJ2 640 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 B3GNT9Q6UX72 402 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 MRPL10Q7Z7H8 261 aaKnown RBP20.59■□□□□ 0.89
ABCD4-228ENST00000557588 KIAA2013Q8IYS2 634 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 RNF168Q8IYW5 571 aaPredicted RBP20.59■□□□□ 0.89
ABCD4-228ENST00000557588 SLC44A3Q8N4M1 653 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 CCDC148Q8NFR7 591 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 MYADMQ96S97 322 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 IFT122Q9HBG6 1241 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 MARCH5Q9NX47 278 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 KANSL3Q9P2N6 904 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 SSX2IPQ9Y2D8 614 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 FAN1Q9Y2M0 1017 aa20.59■□□□□ 0.89
ABCD4-228ENST00000557588 CCDC195A0A1B0GUA6 201 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 STK25O00506 426 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 C2CD2LO14523 706 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 NRP1O14786 923 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 TEX28O15482 410 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 PRPF3O43395 683 aaKnown RBP20.58■□□□□ 0.89
ABCD4-228ENST00000557588 EFEMP2O95967 443 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 GLUD1P00367 558 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 ALDH2P05091 517 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 AK2P54819 239 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 PUM1Q14671 1186 aaKnown RBP eCLIP20.58■□□□□ 0.89
ABCD4-228ENST00000557588 MIER3Q7Z3K6 550 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 KSR1Q8IVT5 923 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 RASEFQ8IZ41 740 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 RIN2Q8WYP3 895 aaPredicted RBP20.58■□□□□ 0.89
ABCD4-228ENST00000557588 GJA10Q969M2 543 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 SH2D3AQ9BRG2 576 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 ARHGEF3Q9NR81 526 aa20.58■□□□□ 0.89
ABCD4-228ENST00000557588 EPG5Q9HCE0 2579 aa20.57■□□□□ 0.88
ABCD4-228ENST00000557588 GPR152Q8TDT2 470 aa20.57■□□□□ 0.88
ABCD4-228ENST00000557588 HDAC7Q8WUI4 952 aa20.57■□□□□ 0.88
ABCD4-228ENST00000557588 ZNF707Q96C28 371 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-228ENST00000557588 FAM193BQ96PV7 902 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-228ENST00000557588 JPH2Q9BR39 696 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-228ENST00000557588 RXFP1Q9HBX9 757 aa20.57■□□□□ 0.88
ABCD4-228ENST00000557588 NAP1L2Q9ULW6 460 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-228ENST00000557588 RFPL2O75678 378 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 C1RP00736 705 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 SP9P0CG40 484 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 GLUD2P49448 558 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 KRT32Q14532 448 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 Q4G0T1 1027 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 UBXN11Q5T124 520 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 ANO5Q75V66 913 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 SMG7Q92540 1137 aaKnown RBP20.56■□□□□ 0.88
ABCD4-228ENST00000557588 RUBCNQ92622 972 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 SLC2A4RGQ9NR83 387 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 DLL3Q9NYJ7 618 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 COL4A3BPQ9Y5P4 624 aa20.56■□□□□ 0.88
ABCD4-228ENST00000557588 MTCL1Q9Y4B5 1905 aaKnown RBP20.56■□□□□ 0.88
ABCD4-228ENST00000557588 CACNA1BQ00975 2339 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 ANHXE9PGG2 379 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 POMCP01189 267 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 DCNP07585 359 aaKnown RBP20.55■□□□□ 0.88
ABCD4-228ENST00000557588 HMGB1P09429 215 aaKnown RBP20.55■□□□□ 0.88
ABCD4-228ENST00000557588 HOXA11P31270 313 aaPredicted RBP20.55■□□□□ 0.88
ABCD4-228ENST00000557588 HTR4Q13639 388 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 SPECC1Q5M775 1068 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 KIAA0319Q5VV43 1072 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 C1orf210Q8IVY1 113 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 COLGALT2Q8IYK4 626 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 HINFPQ9BQA5 517 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 RNF26Q9BY78 433 aaPredicted RBP20.55■□□□□ 0.88
ABCD4-228ENST00000557588 ZDHHC7Q9NXF8 308 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.55■□□□□ 0.88
ABCD4-228ENST00000557588 PRG3Q9Y2Y8 225 aaPredicted RBP20.55■□□□□ 0.88
ABCD4-228ENST00000557588 SIT1Q9Y3P8 196 aa20.55■□□□□ 0.88
ABCD4-228ENST00000557588 GPR179Q6PRD1 2367 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 LAMP2P13473 410 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
ABCD4-228ENST00000557588 DSG1Q02413 1049 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 DSC1Q08554 894 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 TAS1R1Q7RTX1 841 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 SRGAP1Q7Z6B7 1085 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 PJA1Q8NG27 643 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 ETNPPLQ8TBG4 499 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 PHKBQ93100 1093 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 PLEKHA4Q9H4M7 779 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 UBN1Q9NPG3 1134 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 VPS54Q9P1Q0 977 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 PATJQ8NI35 1801 aa20.54■□□□□ 0.88
ABCD4-228ENST00000557588 MIA3Q5JRA6 1907 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms