RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ETF1P62495 437 aaKnown RBP5.73□□□□□ -1.49
ATXN3-247ENST00000557311 PURAQ00577 322 aaKnown RBP5.73□□□□□ -1.49
ATXN3-247ENST00000557311 SEPT6Q14141 434 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 PKN1Q16512 942 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 LRRFIP1Q32MZ4 808 aaKnown RBP5.73□□□□□ -1.49
ATXN3-247ENST00000557311 FAM47CQ5HY64 1035 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 NFRKBQ6P4R8 1299 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 CTR9Q6PD62 1173 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 FAM43BQ6ZT52 329 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-247ENST00000557311 ZNF765Q7L2R6 523 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 RPAP2Q8IXW5 612 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-247ENST00000557311 RNF214Q8ND24 703 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 NEK9Q8TD19 979 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 ISL2Q96A47 359 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 PRRX2Q99811 253 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 PDCL3Q9H2J4 239 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 MKNK2Q9HBH9 465 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 VTA1Q9NP79 307 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 A1CFQ9NQ94 594 aaKnown RBP5.73□□□□□ -1.49
ATXN3-247ENST00000557311 CLIP2Q9UDT6 1046 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 SYNPO2Q9UMS6 1093 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 ATAD5Q96QE3 1844 aa5.73□□□□□ -1.49
ATXN3-247ENST00000557311 SMCHD1A6NHR9 2005 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 FRMPD3Q5JV73 1810 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 MUC6Q6W4X9 2439 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 LOC102724159A0A0B4J2E5 919 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 ABHD14A-ACY1A0A1B0GW23 586 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 LCHNA4D1U4 455 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 LINC01553A4QN01 128 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 MAFGO15525 162 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 EFCAB14O75071 495 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 GJB5O95377 273 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 RLBP1P12271 317 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 PTGS1P23219 599 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 ADD2P35612 726 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 LIG3P49916 1009 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 MFAP1P55081 439 aaKnown RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 WDR5P61964 334 aaKnown RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 PWP2Q15269 919 aaKnown RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 UBE3CQ15386 1083 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 HSP90AB4PQ58FF6 505 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 WIPI1Q5MNZ9 446 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 SLFN13Q68D06 897 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 EEPD1Q7L9B9 569 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 SPRED2Q7Z698 418 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 RELL1Q8IUW5 271 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 ZNF444Q8N0Y2 327 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 TOP6BLQ8N6T0 577 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 CAGE1Q8TC20 777 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 MORC4Q8TE76 937 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 GDPD5Q8WTR4 605 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 CHURC1Q8WUH1 139 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 STAG1Q8WVM7 1258 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 FRAT1Q92837 279 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 PLPPR2Q96GM1 343 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 CRELD1Q96HD1 420 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 CRBNQ96SW2 442 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 WDR11Q9BZH6 1224 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 ZNF287Q9HBT7 754 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 HOMER2Q9NSB8 354 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 RNF146Q9NTX7 359 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 ADD3Q9UEY8 706 aaKnown RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 PCDHB5Q9Y5E4 795 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 SLC4A4Q9Y6R1 1079 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 TCF20Q9UGU0 1960 aaKnown RBP5.72□□□□□ -1.49
ATXN3-247ENST00000557311 MYO9BQ13459 2157 aa5.72□□□□□ -1.49
ATXN3-247ENST00000557311 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.49
ATXN3-247ENST00000557311 PLXNA1Q9UIW2 1896 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 IGKV6D-41A0A0C4DH26 115 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 RBM47A0AV96 593 aaKnown RBP5.71□□□□□ -1.5
ATXN3-247ENST00000557311 PRR19A6NJB7 356 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 TMEM232C9JQI7 657 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-247ENST00000557311 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-247ENST00000557311 PAX4O43316 350 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 NCK2O43639 380 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 PLA2G6O60733 806 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 TTLL1O95922 423 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 ALAS1P13196 640 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 GBP2P32456 591 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-247ENST00000557311 IRAK1P51617 712 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 GP2P55259 537 aaKnown RBP5.71□□□□□ -1.5
ATXN3-247ENST00000557311 ZP2Q05996 745 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 GPNMBQ14956 572 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 PTGISQ16647 500 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 SBK1Q52WX2 424 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 TAF3Q5VWG9 929 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 LRFN4Q6PJG9 635 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 OGFOD3Q6PK18 319 aa5.71□□□□□ -1.5
ATXN3-247ENST00000557311 BMP8AQ7Z5Y6 402 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms