RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 NPY5RQ15761 445 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 ASCL5Q7RTU5 278 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 TRIM22Q8IYM9 498 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 RNF168Q8IYW5 571 aaPredicted RBP11.34□□□□□ -0.59
RDH11-209ENST00000557273 GJA10Q969M2 543 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 KLHL5Q96PQ7 755 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 DHX33Q9H6R0 707 aaKnown RBP11.34□□□□□ -0.59
RDH11-209ENST00000557273 RSAD1Q9HA92 442 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 PCDHB2Q9Y5E7 798 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 FANCMQ8IYD8 2048 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 VPS13AQ96RL7 3174 aa11.34□□□□□ -0.59
RDH11-209ENST00000557273 EP300Q09472 2414 aaPredicted RBP11.34□□□□□ -0.59
RDH11-209ENST00000557273 CACNA1AO00555 2505 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 EPB41L2O43491 1005 aaKnown RBP11.33□□□□□ -0.6
RDH11-209ENST00000557273 GAS2O43903 313 aaKnown RBP11.33□□□□□ -0.6
RDH11-209ENST00000557273 DKC1O60832 514 aaKnown RBP eCLIP11.33□□□□□ -0.6
RDH11-209ENST00000557273 DDHD2O94830 711 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 DEXIO95424 95 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 EFEMP2O95967 443 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 SOD2P04179 222 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 CNPP09543 421 aaKnown RBP11.33□□□□□ -0.6
RDH11-209ENST00000557273 HOXA11P31270 313 aaPredicted RBP11.33□□□□□ -0.6
RDH11-209ENST00000557273 CA8P35219 290 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 QARSP47897 775 aaKnown RBP11.33□□□□□ -0.6
RDH11-209ENST00000557273 PCBP1Q15365 356 aaKnown RBP eCLIP11.33□□□□□ -0.6
RDH11-209ENST00000557273 LETM2Q2VYF4 491 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 KANK3Q6NY19 840 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 TMC5Q6UXY8 1006 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 ZNF280BQ86YH2 543 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 KSR1Q8IVT5 923 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 BLIDQ8IZY5 108 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 URGCPQ8TCY9 931 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 FAM20AQ96MK3 541 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 NLRP4Q96MN2 994 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 RTP3Q9BQQ7 232 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 SH2D3AQ9BRG2 576 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 MFSD1Q9H3U5 465 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 KCNMB3Q9NPA1 279 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 MRPL17Q9NRX2 175 aaKnown RBP11.33□□□□□ -0.6
RDH11-209ENST00000557273 IGSF9Q9P2J2 1179 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 VAV3Q9UKW4 847 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 INPP5FQ9Y2H2 1132 aa11.33□□□□□ -0.6
RDH11-209ENST00000557273 DCHS1Q96JQ0 3298 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 EML1O00423 815 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 ALDH2P05091 517 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 NPR3P17342 541 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
RDH11-209ENST00000557273 KLRC2P26717 231 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 RFC5P40937 340 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
RDH11-209ENST00000557273 UBXN11Q5T124 520 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 SKAP1Q86WV1 359 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 C4orf19Q8IY42 314 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 GPR65Q8IYL9 337 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 FEZF2Q8TBJ5 459 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 PSPC1Q8WXF1 523 aaKnown RBP11.32□□□□□ -0.6
RDH11-209ENST00000557273 NKD2Q969F2 451 aaPredicted RBP11.32□□□□□ -0.6
RDH11-209ENST00000557273 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 RPS6KC1Q96S38 1066 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 HERC2P3Q9BVR0 1158 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 RXFP1Q9HBX9 757 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 NCOA5Q9HCD5 579 aaKnown RBP11.32□□□□□ -0.6
RDH11-209ENST00000557273 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
RDH11-209ENST00000557273 DPP7Q9UHL4 492 aa11.32□□□□□ -0.6
RDH11-209ENST00000557273 ZMYM2Q9UBW7 1377 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 NRP1O14786 923 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 TBX3O15119 743 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 ASAP2O43150 1006 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 SLC37A4O43826 429 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 URODP06132 367 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 ADH1AP07327 375 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 AXLP30530 894 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 AFF1P51825 1210 aaKnown RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 CCT2P78371 535 aaKnown RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 DSC1Q08554 894 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 SSRP1Q08945 709 aaKnown RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 LONRF3Q496Y0 759 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 PLA2G4FQ68DD2 849 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 ELMSAN1Q6PJG2 1045 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
RDH11-209ENST00000557273 COLGALT2Q8IYK4 626 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 HDAC7Q8WUI4 952 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 STAMQ92783 540 aa11.31□□□□□ -0.6
RDH11-209ENST00000557273 NXPE3Q969Y0 559 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms