RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NEK4P51957 841 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 ITIH3Q06033 890 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 MXD4Q14582 209 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-213ENST00000557262 CES5AQ6NT32 575 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 TMEM173Q86WV6 379 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-213ENST00000557262 ZNF280BQ86YH2 543 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 NSUN7Q8NE18 718 aaKnown RBP17.72■□□□□ 0.43
TUBB3-213ENST00000557262 URGCPQ8TCY9 931 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 MTRQ99707 1265 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 GBP3Q9H0R5 595 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 ADAM7Q9H2U9 754 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 DNAJB4Q9UDY4 337 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 CNTNAP2Q9UHC6 1331 aa17.72■□□□□ 0.43
TUBB3-213ENST00000557262 WDFY4Q6ZS81 3184 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 TMEM221A6NGB7 291 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 M0R296 226 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 SLC11A1P49279 550 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 TRIM29Q14134 588 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 PCBP1Q15365 356 aaKnown RBP eCLIP17.71■□□□□ 0.43
TUBB3-213ENST00000557262 CALCRLQ16602 461 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 UBXN11Q5T124 520 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 CNNM3Q8NE01 707 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 AUTS2Q8WXX7 1259 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 PBXIP1Q96AQ6 731 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 FBXL18Q96ME1 805 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 FAM193BQ96PV7 902 aaPredicted RBP17.71■□□□□ 0.43
TUBB3-213ENST00000557262 TTC12Q9H892 705 aaPredicted RBP17.71■□□□□ 0.43
TUBB3-213ENST00000557262 RSAD1Q9HA92 442 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 XPNPEP1Q9NQW7 623 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 ANKEF1Q9NU02 776 aa17.71■□□□□ 0.43
TUBB3-213ENST00000557262 TECTAO75443 2155 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.7■□□□□ 0.42
TUBB3-213ENST00000557262 DDHD2O94830 711 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 ERLIN2O94905 339 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
TUBB3-213ENST00000557262 AXLP30530 894 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 TXKP42681 527 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 PTENP60484 403 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 NCBP1Q09161 790 aaKnown RBP17.7■□□□□ 0.42
TUBB3-213ENST00000557262 TFDP1Q14186 410 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
TUBB3-213ENST00000557262 BCL7CQ8WUZ0 217 aaPredicted RBP17.7■□□□□ 0.42
TUBB3-213ENST00000557262 NECTIN4Q96NY8 510 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 TMEM175Q9BSA9 504 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 UBN1Q9NPG3 1134 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 STK39Q9UEW8 545 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 FAN1Q9Y2M0 1017 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 NR2E1Q9Y466 385 aa17.7■□□□□ 0.42
TUBB3-213ENST00000557262 DGAT1O75907 488 aa17.69■□□□□ 0.42
TUBB3-213ENST00000557262 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
TUBB3-213ENST00000557262 ITGA4P13612 1032 aa17.69■□□□□ 0.42
TUBB3-213ENST00000557262 AFF1P51825 1210 aaKnown RBP17.69■□□□□ 0.42
TUBB3-213ENST00000557262 SIGLEC14Q08ET2 396 aa17.69■□□□□ 0.42
TUBB3-213ENST00000557262 IFNLR1Q8IU57 520 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-213ENST00000557262 SMG8Q8ND04 991 aaKnown RBP17.69■□□□□ 0.42
TUBB3-213ENST00000557262 SLC22A17Q8WUG5 538 aa17.69■□□□□ 0.42
TUBB3-213ENST00000557262 MTMR9Q96QG7 549 aa17.69■□□□□ 0.42
TUBB3-213ENST00000557262 DZANK1Q9NVP4 752 aa17.69■□□□□ 0.42
TUBB3-213ENST00000557262 B4GALT3O60512 393 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 NEMFO60524 1076 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 JAK2O60674 1132 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 POMCP01189 267 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 ARL2P36404 184 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 MTHFRP42898 656 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 PTPN21Q16825 1174 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 ATAT1Q5SQI0 421 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 PPFIBP1Q86W92 1011 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 RIPOR3Q96MK2 946 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 CDH22Q9UJ99 828 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 IPPQ9Y573 584 aa17.68■□□□□ 0.42
TUBB3-213ENST00000557262 ZNF318Q5VUA4 2279 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 INO80B-WBP1J3KQ70 363 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 WNT7AO00755 349 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 NRP1O14786 923 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 TSPAN1O60635 241 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 EPCAMP16422 314 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 FOSBP53539 338 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 RARS2Q5T160 578 aaKnown RBP17.67■□□□□ 0.42
TUBB3-213ENST00000557262 NOTUMQ6P988 496 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 C12orf76Q8N812 135 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-213ENST00000557262 PIGOQ8TEQ8 1089 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 CCDC51Q96ER9 411 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 CCDC43Q96MW1 224 aaKnown RBP17.67■□□□□ 0.42
TUBB3-213ENST00000557262 VN1R3Q9BXE9 311 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 EIF2AQ9BY44 585 aaKnown RBP17.67■□□□□ 0.42
TUBB3-213ENST00000557262 CSRNP2Q9H175 543 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 POMKQ9H5K3 350 aa17.67■□□□□ 0.42
TUBB3-213ENST00000557262 A0A087WWV3 80 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 SP100P23497 879 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-213ENST00000557262 RARRES1P49788 294 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 NHLH1Q02575 133 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 CAPSQ13938 189 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
TUBB3-213ENST00000557262 ZBTB33Q86T24 672 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 ALYREFQ86V81 257 aaKnown RBP17.66■□□□□ 0.42
TUBB3-213ENST00000557262 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
TUBB3-213ENST00000557262 FBXL6Q8N531 539 aa17.66■□□□□ 0.42
TUBB3-213ENST00000557262 ASAP3Q8TDY4 903 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms