RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SYMPKQ92797 1274 aaKnown RBP25.26■■□□□ 1.63
TDP1-216ENST00000556867 CPB2Q96IY4 423 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 EPSTI1Q96J88 318 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 C17orf75Q9HAS0 396 aa25.26■■□□□ 1.63
TDP1-216ENST00000556867 EFNA5P52803 228 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 BECN1Q14457 450 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 MAPK6Q16659 721 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 SPECC1Q5M775 1068 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 HELQQ8TDG4 1101 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 P2RX5Q93086 422 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 PGBD4Q96DM1 585 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 TYW1Q9NV66 732 aaKnown RBP25.25■■□□□ 1.63
TDP1-216ENST00000556867 TFIP11Q9UBB9 837 aaKnown RBP25.25■■□□□ 1.63
TDP1-216ENST00000556867 CNTNAP2Q9UHC6 1331 aa25.25■■□□□ 1.63
TDP1-216ENST00000556867 SPTLC2O15270 562 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 PPP6R2O75170 966 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 TXLNAP40222 546 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 DMP1Q13316 513 aaPredicted RBP25.24■■□□□ 1.63
TDP1-216ENST00000556867 NAALADL2Q58DX5 795 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 ATL3Q6DD88 541 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 CNNM3Q8NE01 707 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 RAD54LQ92698 747 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 LPPQ93052 612 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 KIFC3Q9BVG8 833 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 MRPL9Q9BYD2 267 aaKnown RBP25.24■■□□□ 1.63
TDP1-216ENST00000556867 CWH43Q9H720 699 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 HCSTQ9UBK5 93 aa25.24■■□□□ 1.63
TDP1-216ENST00000556867 A0A1B0GUA9 196 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 PRKCBP05771 671 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 NCLP19338 710 aaKnown RBP25.23■■□□□ 1.63
TDP1-216ENST00000556867 NPTX2P47972 431 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 PEX3P56589 373 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 PTPROQ16827 1216 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 GLB1LQ6UWU2 654 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 LRRC55Q6ZSA7 311 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 MICALL1Q8N3F8 863 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 MRPL38Q96DV4 380 aaKnown RBP25.23■■□□□ 1.63
TDP1-216ENST00000556867 EIF2AQ9BY44 585 aaKnown RBP25.23■■□□□ 1.63
TDP1-216ENST00000556867 AAASQ9NRG9 546 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 CCDC39Q9UFE4 941 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 ATG2AQ2TAZ0 1938 aa25.23■■□□□ 1.63
TDP1-216ENST00000556867 MEIS3P2A8K0S8 358 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 ACKR2O00590 384 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 BRD1O95696 1058 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 LAG3P18627 525 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 MCM6Q14566 821 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 LONRF3Q496Y0 759 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 ARSHQ5FYA8 562 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 SPOUT1Q5T280 376 aaKnown RBP25.22■■□□□ 1.63
TDP1-216ENST00000556867 SLC27A1Q6PCB7 646 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 AGMOQ6ZNB7 445 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 GPBP1Q86WP2 473 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 SMG8Q8ND04 991 aaKnown RBP25.22■■□□□ 1.63
TDP1-216ENST00000556867 LARP4BQ92615 738 aaKnown RBP25.22■■□□□ 1.63
TDP1-216ENST00000556867 LMAN2LQ9H0V9 348 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 ARHGAP28Q9P2N2 729 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 STK17AQ9UEE5 414 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 IPPQ9Y573 584 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 MYO7AQ13402 2215 aa25.22■■□□□ 1.63
TDP1-216ENST00000556867 REV3LO60673 3130 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 PHLPP2Q6ZVD8 1323 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 RAD51AP2Q09MP3 1159 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 PRPF4BQ13523 1007 aaKnown RBP25.21■■□□□ 1.63
TDP1-216ENST00000556867 CCDC85BQ15834 202 aaPredicted RBP25.21■■□□□ 1.63
TDP1-216ENST00000556867 CSPP1Q1MSJ5 1256 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 FOXD4L6Q3SYB3 417 aaPredicted RBP25.21■■□□□ 1.63
TDP1-216ENST00000556867 FOXD4L3Q6VB84 417 aaPredicted RBP25.21■■□□□ 1.63
TDP1-216ENST00000556867 KLHL23Q8NBE8 558 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 COLGALT1Q8NBJ5 622 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 PPM1EQ8WY54 764 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 ODF2LQ9ULJ1 636 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 PLAGL2Q9UPG8 496 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 PCDHB12Q9Y5F1 795 aa25.21■■□□□ 1.63
TDP1-216ENST00000556867 PLXNA4Q9HCM2 1894 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 TTLL13PA6NNM8 815 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 CCDC169A6NNP5 214 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 GRM6O15303 877 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 OFD1O75665 1012 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 ITGB1P05556 798 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 PLS3P13797 630 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 NOMO2Q5JPE7 1267 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 SPIRE2Q8WWL2 714 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 NTPCRQ9BSD7 190 aaKnown RBP25.2■■□□□ 1.62
TDP1-216ENST00000556867 TRIM6Q9C030 488 aaPredicted RBP25.2■■□□□ 1.62
TDP1-216ENST00000556867 PDZD7Q9H5P4 517 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 RSAD1Q9HA92 442 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 KMT5AQ9NQR1 393 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 KCNG1Q9UIX4 513 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 ZDHHC9Q9Y397 364 aa25.2■■□□□ 1.62
TDP1-216ENST00000556867 RBM19Q9Y4C8 960 aaKnown RBP25.2■■□□□ 1.62
TDP1-216ENST00000556867 NPHP3-ACAD11A0A0J9YXS1 232 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 SFI1A8K8P3 1242 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 N4BP3O15049 544 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 EDN1P05305 212 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 ITGA4P13612 1032 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 DDIT3P35638 169 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 DHX8Q14562 1220 aaKnown RBP25.19■■□□□ 1.62
TDP1-216ENST00000556867 RRAGBQ5VZM2 374 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 CDR2LQ86X02 465 aaPredicted RBP25.19■■□□□ 1.62
TDP1-216ENST00000556867 KCNG4Q8TDN1 519 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms