RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 UBE2TQ9NPD8 197 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 PDLIM7Q9NR12 457 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 H2AFZP0C0S5 128 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 ANXA13P27216 316 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 TNNT3P45378 269 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 MAP2K1Q02750 393 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 TERF2Q15554 542 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 KCTD19Q17RG1 926 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 SEPT14Q6ZU15 432 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 H2AFVQ71UI9 128 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 UBE2Q2Q8WVN8 375 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 CCDC127Q96BQ5 260 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 ARHGEF26Q96DR7 871 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 OSGEPQ9NPF4 335 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 SEPT11Q9NVA2 429 aaKnown RBP10.99□□□□□ -0.65
TMEM260-211ENST00000556648 HOXC10Q9NYD6 342 aa10.99□□□□□ -0.65
TMEM260-211ENST00000556648 MYPNQ86TC9 1320 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 SOWAHBA6NEL2 793 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 MAFGO15525 162 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 KIF4AO95239 1232 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 ZBTB48P10074 688 aaPredicted RBP10.98□□□□□ -0.65
TMEM260-211ENST00000556648 ABCB4P21439 1286 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 MXI1P50539 228 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 ALDH5A1P51649 535 aaPredicted RBP10.98□□□□□ -0.65
TMEM260-211ENST00000556648 GYS2P54840 703 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 KIF22Q14807 665 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
TMEM260-211ENST00000556648 LBX2Q6XYB7 198 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 OTUD6AQ7L8S5 288 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 ANKRD35Q8N283 1001 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 TMEM174Q8WUU8 243 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 ACP6Q9NPH0 428 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 CYP26B1Q9NR63 512 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 TSKSQ9UJT2 592 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 NCANO14594 1321 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 SYNGAP1Q96PV0 1343 aa10.98□□□□□ -0.65
TMEM260-211ENST00000556648 CNMDO75829 334 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 CNGA1P29973 690 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 WNT7BP56706 349 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 ITIH3Q06033 890 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 GNPTABQ3T906 1256 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 MIS18BP1Q6P0N0 1132 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 CCNI2Q6ZMN8 369 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-211ENST00000556648 VPS36Q86VN1 386 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 ASAP3Q8TDY4 903 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 KIFAP3Q92845 792 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 TMEM143Q96AN5 459 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 OTUD5Q96G74 571 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 KREMEN1Q96MU8 473 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 ATP6V0A4Q9HBG4 840 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 RNF181Q9P0P0 153 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 EXOC7Q9UPT5 735 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 MYH9P35579 1960 aaKnown RBP10.97□□□□□ -0.65
TMEM260-211ENST00000556648 ZSCAN5CA6NGD5 496 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-211ENST00000556648 MAPK13O15264 365 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 CALCAP01258 141 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 UBA1P22314 1058 aaKnown RBP10.97□□□□□ -0.65
TMEM260-211ENST00000556648 SMTNP53814 917 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 EMC2Q15006 297 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 STXBP2Q15833 593 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 CFAP221Q4G0U5 840 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 CHST13Q8NET6 341 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 POMGNT1Q8WZA1 660 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 HVCN1Q96D96 273 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 IWS1Q96ST2 819 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 PCYT2Q99447 389 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 AGPAT1Q99943 283 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 PAGR1Q9BTK6 254 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-211ENST00000556648 THAP2Q9H0W7 228 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 ADARB2Q9NS39 739 aaKnown RBP10.97□□□□□ -0.65
TMEM260-211ENST00000556648 ATP8B3O60423 1300 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 SIP14410 1827 aa10.97□□□□□ -0.65
TMEM260-211ENST00000556648 KCNK3O14649 394 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 IRF6O14896 467 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 DGAT1O75907 488 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 SGPL1O95470 568 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 TUBBP07437 444 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 TNFAIP3P21580 790 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 ICAM3P32942 547 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 USP8P40818 1118 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 CYP24A1Q07973 514 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 RPS6KA1Q15418 735 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 TAF3Q5VWG9 929 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 EEPD1Q7L9B9 569 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 SLFN11Q7Z7L1 901 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 TAS1R2Q8TE23 839 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 PARD3BQ8TEW8 1205 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 CDHR1Q96JP9 859 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 PCDHB18PQ96TA0 734 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 FAM213AQ9BRX8 229 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 SELENOOQ9BVL4 669 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 ZNF302Q9NR11 478 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 ARHGAP28Q9P2N2 729 aa10.96□□□□□ -0.65
TMEM260-211ENST00000556648 HPCAL4Q9UM19 191 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms