RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RAD54LQ92698 747 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 PGBD4Q96DM1 585 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 EIF2AQ9BY44 585 aaKnown RBP16.78■□□□□ 0.28
ACTN1-217ENST00000556203 FZD8Q9H461 694 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 CWH43Q9H720 699 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 BLOC1S4Q9NUP1 217 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 LMCD1Q9NZU5 365 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 CHD9Q3L8U1 2897 aa16.78■□□□□ 0.28
ACTN1-217ENST00000556203 CCDC169A6NNP5 214 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 SFI1A8K8P3 1242 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 SPTLC2O15270 562 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 PRKCBP05771 671 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 TXLNAP40222 546 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 BECN1Q14457 450 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 DHX8Q14562 1220 aaKnown RBP16.77■□□□□ 0.28
ACTN1-217ENST00000556203 MCM6Q14566 821 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 FAM187BQ17R55 369 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 GLB1LQ6UWU2 654 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 MRPL10Q7Z7H8 261 aaKnown RBP16.77■□□□□ 0.28
ACTN1-217ENST00000556203 CDR2LQ86X02 465 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-217ENST00000556203 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 MRPL38Q96DV4 380 aaKnown RBP16.77■□□□□ 0.28
ACTN1-217ENST00000556203 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 AAASQ9NRG9 546 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 KCND2Q9NZV8 630 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-217ENST00000556203 CCDC39Q9UFE4 941 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 INPP5FQ9Y2H2 1132 aa16.77■□□□□ 0.28
ACTN1-217ENST00000556203 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.27
ACTN1-217ENST00000556203 CNTNAP2Q9UHC6 1331 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 COL4A4P53420 1690 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 TTLL13PA6NNM8 815 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 GRM6O15303 877 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 OFD1O75665 1012 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 YEATS4O95619 227 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 LAG3P18627 525 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 NPTX2P47972 431 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 EFNA5P52803 228 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 PRPF4BQ13523 1007 aaKnown RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 TMEM132AQ24JP5 1023 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 NAALADL2Q58DX5 795 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 ARSHQ5FYA8 562 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 AGMOQ6ZNB7 445 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 GPBP1Q86WP2 473 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 COLGALT1Q8NBJ5 622 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 SMG8Q8ND04 991 aaKnown RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 CNNM3Q8NE01 707 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 P2RX5Q93086 422 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 MRPL9Q9BYD2 267 aaKnown RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 TRIM6Q9C030 488 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 ALG13Q9NP73 1137 aaKnown RBP16.76■□□□□ 0.27
ACTN1-217ENST00000556203 PLAGL2Q9UPG8 496 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 USP20Q9Y2K6 914 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 IPPQ9Y573 584 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 PCDHB12Q9Y5F1 795 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 MYO9BQ13459 2157 aa16.76■□□□□ 0.27
ACTN1-217ENST00000556203 ACKR2O00590 384 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 PPP6R2O75170 966 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 CSPG5O95196 566 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 NPTXRO95502 500 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 BRD1O95696 1058 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 ITGB1P05556 798 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 ITGA4P13612 1032 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 PLS3P13797 630 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 SKIV2LQ15477 1246 aaKnown RBP16.75■□□□□ 0.27
ACTN1-217ENST00000556203 NOMO2Q5JPE7 1267 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 RRAGBQ5VZM2 374 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 SLC27A1Q6PCB7 646 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 THNSL1Q8IYQ7 743 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 RSPH1Q8WYR4 309 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
ACTN1-217ENST00000556203 APOL6Q9BWW8 343 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 RSAD1Q9HA92 442 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 KMT5AQ9NQR1 393 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 PRDM6Q9NQX0 595 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 HES2Q9Y543 173 aa16.75■□□□□ 0.27
ACTN1-217ENST00000556203 COL6A3P12111 3177 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 K7ERI5 159 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 N4BP3O15049 544 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 SLC16A4O15374 487 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 EDN1P05305 212 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 DDIT3P35638 169 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 PBX3P40426 434 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 DNM1Q05193 864 aaKnown RBP16.74■□□□□ 0.27
ACTN1-217ENST00000556203 CSPP1Q1MSJ5 1256 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.74■□□□□ 0.27
ACTN1-217ENST00000556203 SLC17A8Q8NDX2 589 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 REEP2Q9BRK0 252 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 LMAN2LQ9H0V9 348 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
ACTN1-217ENST00000556203 PDZD7Q9H5P4 517 aa16.74■□□□□ 0.27
ACTN1-217ENST00000556203 TBC1D13Q9NVG8 400 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms