RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 VTI1BQ9UEU0 232 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 ZKSCAN5Q9Y2L8 839 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 RABGAP1Q9Y3P9 1069 aa7.58□□□□□ -1.2
SLIRP-204ENST00000555890 SMCHD1A6NHR9 2005 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 KDM3AQ9Y4C1 1321 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 GPR182O15218 404 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 FLOT1O75955 427 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 CFBP00751 764 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 SERPINC1P01008 464 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 ICAM1P05362 532 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 PLCG1P19174 1290 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 BMP6P22004 513 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 CIITAP33076 1130 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 PPP1R2P41236 205 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 WNT7BP56706 349 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
SLIRP-204ENST00000555890 FANCCQ00597 558 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 STIM1Q13586 685 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 CUL4BQ13620 913 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 KCNB1Q14721 858 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 TPD52L1Q16890 204 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-204ENST00000555890 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 Q4G0T1 1027 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 ZNF658Q5TYW1 1059 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-204ENST00000555890 SPATA1Q5VX52 437 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 ALG1LQ6GMV1 187 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-204ENST00000555890 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 ZNF280CQ8ND82 737 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 SNX29Q8TEQ0 813 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 WHAMMQ8TF30 809 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 STAMQ92783 540 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 HAS1Q92839 578 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 RNF34Q969K3 372 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 MYO19Q96H55 970 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 FAM20AQ96MK3 541 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 PLIN2Q99541 437 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 C7orf25Q9BPX7 421 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 TGIF2Q9GZN2 237 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 NT5C3AQ9H0P0 336 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 BLZF1Q9H2G9 400 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 CYLDQ9NQC7 956 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 MAP3K20Q9NYL2 800 aaKnown RBP7.57□□□□□ -1.2
SLIRP-204ENST00000555890 TMOD4Q9NZQ9 345 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 IMPACTQ9P2X3 320 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 MORF4L1Q9UBU8 362 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 CCPG1Q9ULG6 757 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 AGTPBP1Q9UPW5 1226 aa7.57□□□□□ -1.2
SLIRP-204ENST00000555890 PLXNA1Q9UIW2 1896 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 A6NJY4 79 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 OPLAHO14841 1288 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 EDIL3O43854 480 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 PMLP29590 882 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 HOXA13P31271 388 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-204ENST00000555890 CCT6AP40227 531 aaKnown RBP7.56□□□□□ -1.2
SLIRP-204ENST00000555890 BACE1P56817 501 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 UBASH3AP57075 661 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 SPP2Q13103 211 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 GRB10Q13322 594 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 SNX17Q15036 470 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 PRR16Q569H4 304 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 TMEM240Q5SV17 173 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 HAUS3Q68CZ6 603 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 UNQ6494/PRO21346Q6UXR6 183 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 FCHSD1Q86WN1 690 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 SMCR8Q8TEV9 937 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-204ENST00000555890 CRYGNQ8WXF5 182 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 CDK15Q96Q40 435 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 MMTAG2Q9BU76 263 aaKnown RBP7.56□□□□□ -1.2
SLIRP-204ENST00000555890 RPAP3Q9H6T3 665 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-204ENST00000555890 TXNRD2Q9NNW7 524 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 KCNMB3Q9NPA1 279 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 FBXO28Q9NVF7 368 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 IFNKQ9P0W0 207 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 RWDD2AQ9UIY3 292 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 PPP1R9AQ9ULJ8 1098 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
SLIRP-204ENST00000555890 PARP14Q460N5 1801 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 LOC400499M0QZD8 3231 aa7.56□□□□□ -1.2
SLIRP-204ENST00000555890 SYNRGQ9UMZ2 1314 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 PVALEFA0A1B0GWK0 134 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 TMEM8BA6NDV4 472 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 KIAA0355O15063 1070 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 NRDCO43847 1150 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 RHOBTB3O94955 611 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 VCAM1P19320 739 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
SLIRP-204ENST00000555890 CASP1P29466 404 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 SMTNP53814 917 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 GSDMDP57764 484 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 ASIC1P78348 528 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 SPAG1Q07617 926 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 ENOX2Q16206 610 aaKnown RBP7.55□□□□□ -1.2
SLIRP-204ENST00000555890 FILIP1LQ4L180 1135 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 HYIQ5T013 277 aa7.55□□□□□ -1.2
SLIRP-204ENST00000555890 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms