RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SLC26A4O43511 780 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 USO1O60763 962 aaKnown RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 KINO60870 393 aaKnown RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 ITGB1P05556 798 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 SRGAP2CP0DJJ0 459 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 SKIP12755 728 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 PFKFB1P16118 471 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 LAG3P18627 525 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 ARL2P36404 184 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 PTENP60484 403 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 GRIN1Q05586 938 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CAPSQ13938 189 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CAMK1Q14012 370 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 TFDP1Q14186 410 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 KLHL40Q2TBA0 621 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CLLU1OSQ5K130 101 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 KRT79Q5XKE5 535 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 TWF2Q6IBS0 349 aaKnown RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 KLHL23Q8NBE8 558 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 RNF149Q8NC42 400 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 ASAP3Q8TDY4 903 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 SYAP1Q96A49 352 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CALML4Q96GE6 196 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CASD1Q96PB1 797 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 NFKBIZQ9BYH8 718 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 POLR3FQ9H1D9 316 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 CWH43Q9H720 699 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 UBE2ZQ9H832 354 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 MINDY3Q9H8M7 445 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 ALG13Q9NP73 1137 aaKnown RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 TYW1Q9NV66 732 aaKnown RBP10.66□□□□□ -0.7
ACTN1-215ENST00000555616 HCSTQ9UBK5 93 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 KCNH3Q9ULD8 1083 aa10.66□□□□□ -0.7
ACTN1-215ENST00000555616 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-215ENST00000555616 FAM237AA0A1B0GTK4 181 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 TRAK2O60296 914 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 TSPAN1O60635 241 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 ZNF623O75123 536 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 GLRA2P23416 452 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 DNAJB1P25685 340 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 HOXA11P31270 313 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-215ENST00000555616 CCT6AP40227 531 aaKnown RBP10.65□□□□□ -0.7
ACTN1-215ENST00000555616 SYKP43405 635 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 NDUFA8P51970 172 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 UBE3AQ05086 875 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 MBTD1Q05BQ5 628 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 TCEAL5Q5H9L2 206 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 SPECC1Q5M775 1068 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 LRRC55Q6ZSA7 311 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 CABP7Q86V35 215 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 RNF169Q8NCN4 708 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 SPPL3Q8TCT6 385 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 GPT2Q8TD30 523 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 ADAMTS19Q8TE59 1207 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 SNX29Q8TEQ0 813 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 CCDC51Q96ER9 411 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 EPSTI1Q96J88 318 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 MRPL9Q9BYD2 267 aaKnown RBP10.65□□□□□ -0.7
ACTN1-215ENST00000555616 CCSER1Q9C0I3 900 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 DDX19AQ9NUU7 478 aaKnown RBP10.65□□□□□ -0.7
ACTN1-215ENST00000555616 PCDHB12Q9Y5F1 795 aa10.65□□□□□ -0.7
ACTN1-215ENST00000555616 FNDC1Q4ZHG4 1894 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-215ENST00000555616 ATG2AQ2TAZ0 1938 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 A0A087WWV3 80 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 ARHGEF35A5YM69 484 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 PP2D1A8MPX8 630 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 FGF18O76093 207 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 ERLIN2O94905 339 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 BMP1P13497 986 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 LIG1P18858 919 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 PPM1AP35813 382 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 KCNQ1P51787 676 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 ECM1Q16610 540 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 AMHR2Q16671 573 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 UBXN11Q5T124 520 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 CDCA2Q69YH5 1023 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-215ENST00000555616 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 GLB1LQ6UWU2 654 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 IQUBQ8NA54 791 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 POF1BQ8WVV4 589 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 PABPC5Q96DU9 382 aaKnown RBP10.64□□□□□ -0.71
ACTN1-215ENST00000555616 NT5C3AQ9H0P0 336 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 GOLPH3LQ9H4A5 285 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 GPRC5CQ9NQ84 441 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 USP25Q9UHP3 1055 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 HOOK1Q9UJC3 728 aaKnown RBP10.64□□□□□ -0.71
ACTN1-215ENST00000555616 HPSEQ9Y251 543 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 PCDHB2Q9Y5E7 798 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 BRWD1Q9NSI6 2320 aa10.64□□□□□ -0.71
ACTN1-215ENST00000555616 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
ACTN1-215ENST00000555616 INO80B-WBP1J3KQ70 363 aa10.63□□□□□ -0.71
ACTN1-215ENST00000555616 POLR2DO15514 142 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms