RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 CCL5P13501 91 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 KRT13P13646 458 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 KLK7P49862 253 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 ACLYP53396 1101 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 CCDC173Q0VFZ6 552 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 ITGA7Q13683 1181 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 CBWD2Q8IUF1 395 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 PCSK9Q8NBP7 692 aaKnown RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 GTPBP4Q9BZE4 634 aaKnown RBP11.15□□□□□ -0.62
NEK9-205ENST00000555405 TRPV6Q9H1D0 765 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 PDLIM7Q9NR12 457 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 HSPBP1Q9NZL4 362 aa11.15□□□□□ -0.62
NEK9-205ENST00000555405 NRCAMQ92823 1304 aa11.15□□□□□ -0.63
NEK9-205ENST00000555405 CLDN3O15551 220 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 ADKP55263 362 aaKnown RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 APBA1Q02410 837 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 MSTO1Q9BUK6 570 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 PQBP1O60828 265 aaKnown RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 ADAMTS4O75173 837 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 GNAT1P11488 350 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 PHKA2P46019 1235 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 PTGISQ16647 500 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 EPM2AIP1Q7L775 607 aaPredicted RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 CEP120Q8N960 986 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 TIPINQ9BVW5 301 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 THAP9Q9H5L6 903 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 M0QZ92 97 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 ZNF18P17022 549 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 GTF2BQ00403 316 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 ARID5AQ03989 594 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 SYCP1Q15431 976 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 EEF1DP3Q658K8 133 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 PPFIBP1Q86W92 1011 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 XXYLT1Q8NBI6 393 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 ARRDC4Q8NCT1 418 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
NEK9-205ENST00000555405 TRIM6Q9C030 488 aaPredicted RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
NEK9-205ENST00000555405 EIF3DO15371 548 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEK9-205ENST00000555405 GNRH1P01148 92 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 EDN1P05305 212 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 TNNI1P19237 187 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 PSMC2P35998 433 aaKnown RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 GCLMP48507 274 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 NCKAP1LP55160 1127 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 ZBTB41Q5SVQ8 909 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 LRRC55Q6ZSA7 311 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 TAS1R3Q7RTX0 852 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 TRIM21P19474 475 aaKnown RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 CDKAL1Q5VV42 579 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 EXOC8Q8IYI6 725 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 SPIRE2Q8WWL2 714 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 CTAGE1Q96RT6 745 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 NDST4Q9H3R1 872 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 TOPORSQ9NS56 1045 aaPredicted RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 AGO2Q9UKV8 859 aaKnown RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 HES2Q9Y543 173 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 MYH11P35749 1972 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 BIRC3Q13489 604 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 CTU1Q7Z7A3 348 aaKnown RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 MRPL4Q9BYD3 311 aaKnown RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 C17orf75Q9HAS0 396 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 PIN4Q9Y237 131 aaKnown RBP11.13□□□□□ -0.63
NEK9-205ENST00000555405 Q9Y3F1 56 aa11.13□□□□□ -0.63
NEK9-205ENST00000555405 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 GHRP10912 638 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 ADSSP30520 456 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 DLG4P78352 724 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 NCBP1Q09161 790 aaKnown RBP11.12□□□□□ -0.63
NEK9-205ENST00000555405 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 LHX8Q68G74 356 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 INTS13Q9NVM9 706 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 ARHGAP28Q9P2N2 729 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 HSPA8P11142 646 aaKnown RBP11.12□□□□□ -0.63
NEK9-205ENST00000555405 GPC3P51654 580 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 ZCWPW2Q504Y3 356 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 WNT8BQ93098 351 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 ZMYM2Q9UBW7 1377 aa11.12□□□□□ -0.63
NEK9-205ENST00000555405 H0YCG3 227 aa11.11□□□□□ -0.63
NEK9-205ENST00000555405 PHACTR2O75167 634 aa11.11□□□□□ -0.63
NEK9-205ENST00000555405 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
NEK9-205ENST00000555405 TNFSF9P41273 254 aa11.11□□□□□ -0.63
NEK9-205ENST00000555405 PTENP60484 403 aa11.11□□□□□ -0.63
NEK9-205ENST00000555405 VWA3BQ502W6 1294 aa11.11□□□□□ -0.63
NEK9-205ENST00000555405 CT47A1Q5JQC4 288 aaPredicted RBP11.11□□□□□ -0.63
NEK9-205ENST00000555405 SLC39A4Q6P5W5 647 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms