RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 OLFML2BQ68BL8 750 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 CREB3L3Q68CJ9 461 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 SNRNP48Q6IEG0 339 aaKnown RBP5.4□□□□□ -1.54
ATXN3-231ENST00000554994 LILRA6Q6PI73 481 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 SYNE3Q6ZMZ3 975 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 TMCO2Q7Z6W1 182 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-231ENST00000554994 RAB11FIP4Q86YS3 637 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 WFDC3Q8IUB2 231 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 CCDC144CPQ8IYA2 1237 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 ANKRD35Q8N283 1001 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 TMEM102Q8N9M5 508 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-231ENST00000554994 NEK9Q8TD19 979 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 GTF3C2Q8WUA4 911 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-231ENST00000554994 TMEM40Q8WWA1 233 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 NXPE3Q969Y0 559 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 VWCEQ96DN2 955 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 C12orf42Q96LP6 360 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 TTC14Q96N46 770 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 MMP19Q99542 508 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 MOV10L1Q9BXT6 1211 aaKnown RBP5.4□□□□□ -1.54
ATXN3-231ENST00000554994 LRRC2Q9BYS8 371 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 LSG1Q9H089 658 aaKnown RBP5.4□□□□□ -1.54
ATXN3-231ENST00000554994 SPATC1LQ9H0A9 340 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 WNT8AQ9H1J5 351 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 CPVLQ9H3G5 476 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 SEMA6CQ9H3T2 930 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 HIPK3Q9H422 1215 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 TCP11L1Q9NUJ3 509 aa5.4□□□□□ -1.54
ATXN3-231ENST00000554994 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.55
ATXN3-231ENST00000554994 DMDP11532 3685 aa5.4□□□□□ -1.55
ATXN3-231ENST00000554994 ROBO3Q96MS0 1386 aa5.4□□□□□ -1.55
ATXN3-231ENST00000554994 MAST4O15021 2626 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 MYH9P35579 1960 aaKnown RBP5.39□□□□□ -1.55
ATXN3-231ENST00000554994 TRIP12Q14669 1992 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-231ENST00000554994 IGKV6D-41A0A0C4DH26 115 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 LRRC10BA6NIK2 292 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 PRC1O43663 620 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 REC8O95072 547 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 SLC25A27O95847 323 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 PGK2P07205 417 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 FGRP09769 529 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 PARP1P09874 1014 aaKnown RBP5.39□□□□□ -1.55
ATXN3-231ENST00000554994 CD8BP10966 210 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 MCM5P33992 734 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 CD96P40200 585 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 ZXDAP98168 799 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 TMEM132BQ14DG7 1078 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 KCNA10Q16322 511 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 OCLNQ16625 522 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 USH1GQ495M9 461 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 C8orf34Q49A92 452 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 RASGRP2Q7LDG7 609 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 DEFB128Q7Z7B8 93 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 FAM160B2Q86V87 743 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 DGKHQ86XP1 1220 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 FAM126BQ8IXS8 530 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 MB21D1Q8N884 522 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 ENAHQ8N8S7 591 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-231ENST00000554994 LRRN4CLQ8ND94 238 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 GLIS3Q8NEA6 775 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 GMCL1P1Q8NEA9 526 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 DCAF4Q8WV16 495 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 FAM84AQ96KN4 292 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 TCEANC2Q96MN5 208 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 NEK1Q96PY6 1258 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 MROH8Q9H579 483 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 RAD18Q9NS91 495 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 SLC5A4Q9NY91 659 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 PRKAG3Q9UGI9 489 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 PPP1R9AQ9ULJ8 1098 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 TAF6LQ9Y6J9 622 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 TNKSO95271 1327 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 ZMYM6O95789 1325 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 SYNRGQ9UMZ2 1314 aa5.39□□□□□ -1.55
ATXN3-231ENST00000554994 WDR81Q562E7 1941 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 PTPDC1A2A3K4 754 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 KLRF2D3W0D1 207 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
ATXN3-231ENST00000554994 DYNC1LI2O43237 492 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-231ENST00000554994 STRNO43815 780 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 ESRRAP11474 423 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-231ENST00000554994 CPA1P15085 419 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 RXRAP19793 462 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 FUT4P22083 530 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 CDK7P50613 346 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 DNM1Q05193 864 aaKnown RBP5.38□□□□□ -1.55
ATXN3-231ENST00000554994 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 SWI5Q1ZZU3 235 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 LBX2Q6XYB7 198 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 STOX1Q6ZVD7 989 aa5.38□□□□□ -1.55
ATXN3-231ENST00000554994 NOL8Q76FK4 1167 aaKnown RBP5.38□□□□□ -1.55
ATXN3-231ENST00000554994 HOMER1Q86YM7 354 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms