RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PLCD4Q9BRC7 762 aa12.77□□□□□ -0.36
XRCC3-208ENST00000554811 STK33Q9BYT3 514 aa12.77□□□□□ -0.36
XRCC3-208ENST00000554811 WRAP73Q9P2S5 460 aaPredicted RBP12.77□□□□□ -0.36
XRCC3-208ENST00000554811 DDX20Q9UHI6 824 aaKnown RBP12.77□□□□□ -0.36
XRCC3-208ENST00000554811 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.36
XRCC3-208ENST00000554811 MYO3BQ8WXR4 1341 aa12.77□□□□□ -0.36
XRCC3-208ENST00000554811 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 FAM107AO95990 144 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 GAP43P17677 238 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 CBWD2Q8IUF1 395 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 EHMT1Q9H9B1 1298 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 KCNG1Q9UIX4 513 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 ANAPC7Q9UJX3 599 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 TRAF3IP3Q9Y228 551 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 SHOX2O60902 331 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 HSPA9P38646 679 aaKnown RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 ITIH3Q06033 890 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 KIAA1755Q5JYT7 1200 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 GJD4Q96KN9 370 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-208ENST00000554811 TCHPQ9BT92 498 aa12.77□□□□□ -0.37
XRCC3-208ENST00000554811 RASGRF2O14827 1237 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 HNRNPDLO14979 420 aaKnown RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 MAP2K2P36507 400 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 SREBF1P36956 1147 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 LDHDQ86WU2 507 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 LARGE2Q8N3Y3 721 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ACSF2Q96CM8 615 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 COG5Q9UP83 839 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 PCNTO95613 3336 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 GBP2P32456 591 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 PPP3CAQ08209 521 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 HVCN1Q96D96 273 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ERP44Q9BS26 406 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ANKFY1Q9P2R3 1169 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 AFF2P51816 1311 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 POC1B-GALNT4F8VUJ3 575 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 PI4K2BG5E9Z4 385 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 RBAK-RBAKDNI3L0D1 243 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 THAP12O43422 761 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 PIAS1O75925 651 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 NPR1P16066 1061 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 SEZ6Q53EL9 994 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 NUGGCQ68CJ6 796 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 CC2D2BQ6DHV5 1058 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ZNF720Q7Z2F6 126 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 KIF2BQ8N4N8 673 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 LRRC57Q8N9N7 239 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 ACTRT1Q8TDG2 376 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 NYAP2Q9P242 653 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 SUCLA2Q9P2R7 463 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-208ENST00000554811 CTNNAL1Q9UBT7 734 aa12.76□□□□□ -0.37
XRCC3-208ENST00000554811 NFIBO00712 420 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 GJB6O95452 261 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 MAPK4P31152 587 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
XRCC3-208ENST00000554811 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 HAUS6Q7Z4H7 955 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 CCDC197Q8NCU1 140 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 PYGMP11217 842 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 PDE6CP51160 858 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 GPC5P78333 572 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 LENG9Q96B70 501 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 KLC4Q9NSK0 619 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 HSPBP1Q9NZL4 362 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 IRS2Q9Y4H2 1338 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 GOLGA8SH3BPF8 625 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 GOLGA8MH3BSY2 632 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 RPL21P46778 160 aaKnown RBP12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SKOR1P84550 965 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SPIRE1Q08AE8 756 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 ZNF365Q70YC5 407 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SRRM1Q8IYB3 904 aaKnown RBP12.75□□□□□ -0.37
XRCC3-208ENST00000554811 LRRC34Q8IZ02 419 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 IL31RAQ8NI17 732 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 CHURC1Q8WUH1 139 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
XRCC3-208ENST00000554811 FAM213AQ9BRX8 229 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SLITRK6Q9H5Y7 841 aa12.75□□□□□ -0.37
XRCC3-208ENST00000554811 SLC40A1Q9NP59 571 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms