RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
SHMT2-212ENST00000554467 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 ADRB2P07550 413 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 AMPD2Q01433 879 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 MYL7Q01449 175 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 OTUD6AQ7L8S5 288 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 GOLPH3Q9H4A6 298 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 CYP26B1Q9NR63 512 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 TOPORSQ9NS56 1045 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 ANKEF1Q9NU02 776 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 RAB21Q9UL25 225 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 MYH9P35579 1960 aaKnown RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 TMCO5BA8MYB1 307 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 SUPT20HL2P0C7V6 817 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 SRGAP1Q7Z6B7 1085 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 EFCAB13Q8IY85 973 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 NOA1Q8NC60 698 aaKnown RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 ZNF668Q96K58 619 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 POLR3FQ9H1D9 316 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 EHD2Q9NZN4 543 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 TBX20Q9UMR3 447 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 ARIH2O95376 493 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 CTAGE8P0CG41 777 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 GTF2BQ00403 316 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 MIS18BP1Q6P0N0 1132 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 HDXQ7Z353 690 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 CTAGE4Q8IX94 777 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 EDEM3Q9BZQ6 932 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 INTS2Q9H0H0 1204 aaKnown RBP12.69□□□□□ -0.38
SHMT2-212ENST00000554467 ZNF302Q9NR11 478 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 MYO1AQ9UBC5 1043 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 MCM3APO60318 1980 aa12.69□□□□□ -0.38
SHMT2-212ENST00000554467 UBE4BO95155 1302 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MAFGO15525 162 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 KRT13P13646 458 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MICALL1Q8N3F8 863 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 COPS5Q92905 334 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 BICD1Q96G01 975 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 CDHR1Q96JP9 859 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MMS19Q96T76 1030 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 TAF1DQ9H5J8 278 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 PLCB1Q9NQ66 1216 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 DNAJC12Q9UKB3 198 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 GGPS1O95749 300 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 CNGA1P29973 690 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 SMTNP53814 917 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 POLGP54098 1239 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 NCKAP1LP55160 1127 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MOGSQ13724 837 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 SLC39A4Q6P5W5 647 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 FBXO16Q8IX29 292 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 XXYLT1Q8NBI6 393 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 KAT5Q92993 513 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 PORCNQ9H237 461 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 TMEM206Q9H813 350 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 AIPL1Q9NZN9 384 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 AGTPBP1Q9UPW5 1226 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 LCA5LO95447 670 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 KLRC1P26715 233 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 VAMP7P51809 220 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 DRAP1Q14919 205 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 C1orf220Q5T0J3 134 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 LMBRD2Q68DH5 695 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 PHLDB3Q6NSJ2 640 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-212ENST00000554467 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 SENP7Q9BQF6 1050 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
SHMT2-212ENST00000554467 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 CCDC189A1A4V9 331 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 HNRNPDLO14979 420 aaKnown RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 VSNL1P62760 191 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 DRP2Q13474 957 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 FBXW10Q5XX13 1052 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 DNERQ8NFT8 737 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 IWS1Q96ST2 819 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 GSTTP1A0A1W2PQM5 241 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 FTCDO95954 541 aa12.67□□□□□ -0.38
SHMT2-212ENST00000554467 DLATP10515 647 aaKnown RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 HNRNPH1P31943 449 aaKnown RBP12.67□□□□□ -0.38
SHMT2-212ENST00000554467 USP8P40818 1118 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms