RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 B4E1Z4 1266 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 SLC11A1P49279 550 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 SLC35G1Q2M3R5 365 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 ADCK5Q3MIX3 580 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 IFIT1BQ5T764 474 aaKnown RBP19.09■□□□□ 0.65
NEK9-204ENST00000554258 PSAPL1Q6NUJ1 521 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 MTSS1LQ765P7 747 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 MB21D2Q8IYB1 491 aaPredicted RBP19.09■□□□□ 0.65
NEK9-204ENST00000554258 NCOA7Q8NI08 942 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 RSPH1Q8WYR4 309 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 TMEM121BQ9BXQ6 578 aaPredicted RBP19.09■□□□□ 0.65
NEK9-204ENST00000554258 RIOX1Q9H6W3 641 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 ZSWIM5Q9P217 1185 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 DNAJB4Q9UDY4 337 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 INPP5FQ9Y2H2 1132 aa19.09■□□□□ 0.65
NEK9-204ENST00000554258 MYH9P35579 1960 aaKnown RBP19.08■□□□□ 0.65
NEK9-204ENST00000554258 PALM3A6NDB9 673 aaPredicted RBP19.08■□□□□ 0.64
NEK9-204ENST00000554258 TEX28O15482 410 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 URODP06132 367 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 SPATA31D3P0C874 917 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 FSHRP23945 695 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 ADCY1Q08828 1119 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 FOXC1Q12948 553 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 ZNF484Q5JVG2 852 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 ZNF852Q6ZMS4 543 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 SPATA31D4Q6ZUB0 917 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 METTL13Q8N6R0 699 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 KIF12Q96FN5 646 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 UBAC1Q9BSL1 405 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 C22orf23Q9BZE7 217 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 TM6SF1Q9BZW5 370 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 NT5C3AQ9H0P0 336 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 DACT1Q9NYF0 836 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 UBIAD1Q9Y5Z9 338 aa19.08■□□□□ 0.64
NEK9-204ENST00000554258 LAMA5O15230 3695 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 MAFGO15525 162 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 SPINK2P20155 84 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 TRDNQ13061 729 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 SF3A2Q15428 464 aaKnown RBP19.07■□□□□ 0.64
NEK9-204ENST00000554258 STPG1Q5TH74 334 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 GLB1LQ6UWU2 654 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 RPS6KC1Q96S38 1066 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 SDF4Q9BRK5 362 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 MTA3Q9BTC8 594 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 LSM14BQ9BX40 385 aaKnown RBP19.07■□□□□ 0.64
NEK9-204ENST00000554258 CDH7Q9ULB5 785 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 SSX2IPQ9Y2D8 614 aa19.07■□□□□ 0.64
NEK9-204ENST00000554258 HRO43593 1189 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 EIF4BP23588 611 aaKnown RBP19.06■□□□□ 0.64
NEK9-204ENST00000554258 NLRP11P59045 1033 aaKnown RBP19.06■□□□□ 0.64
NEK9-204ENST00000554258 EXOSC10Q01780 885 aaKnown RBP19.06■□□□□ 0.64
NEK9-204ENST00000554258 FZD5Q13467 585 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 NOMO2Q5JPE7 1267 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 CYB5R4Q7L1T6 521 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 HDAC7Q8WUI4 952 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 PIBF1Q8WXW3 757 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 TBC1D32Q96NH3 1257 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 PRKD2Q9BZL6 878 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 CHRDQ9H2X0 955 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 PLEKHA4Q9H4M7 779 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 UPF2Q9HAU5 1272 aaKnown RBP19.06■□□□□ 0.64
NEK9-204ENST00000554258 JADE2Q9NQC1 790 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 ZDHHC7Q9NXF8 308 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 ADAMTS20P59510 1910 aa19.06■□□□□ 0.64
NEK9-204ENST00000554258 ZBTB42B2RXF5 422 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 PIK3CDO00329 1044 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 MEIS2O14770 477 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 BACH1O14867 736 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 PAPLNO95428 1278 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 C22orf31O95567 290 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 HMGB1P09429 215 aaKnown RBP19.05■□□□□ 0.64
NEK9-204ENST00000554258 CCR3P51677 355 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 ANTXR2P58335 489 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 SRSF5Q13243 272 aaKnown RBP19.05■□□□□ 0.64
NEK9-204ENST00000554258 LONRF3Q496Y0 759 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 RALYLQ86SE5 291 aaKnown RBP19.05■□□□□ 0.64
NEK9-204ENST00000554258 FAM160A2Q8N612 972 aaPredicted RBP19.05■□□□□ 0.64
NEK9-204ENST00000554258 LPPQ93052 612 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 KIF2CQ99661 725 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 KXD1Q9BQD3 176 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 ZSWIM6Q9HCJ5 1215 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 RXFP3Q9NSD7 469 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 AKT3Q9Y243 479 aa19.05■□□□□ 0.64
NEK9-204ENST00000554258 CYTH3O43739 400 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 SOD2P04179 222 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 PSMA5P28066 241 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 SOWAHCQ53LP3 525 aaPredicted RBP19.04■□□□□ 0.64
NEK9-204ENST00000554258 FAM160B1Q5W0V3 765 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 MAMSTRQ6ZN01 415 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 DHX32Q7L7V1 743 aaKnown RBP19.04■□□□□ 0.64
NEK9-204ENST00000554258 GATA6Q92908 595 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 IER2Q9BTL4 223 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 PHF20Q9BVI0 1012 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 NDRG2Q9UN36 371 aaKnown RBP19.04■□□□□ 0.64
NEK9-204ENST00000554258 FREM2Q5SZK8 3169 aa19.04■□□□□ 0.64
NEK9-204ENST00000554258 NFASCO94856 1347 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 CHURC1-FNTBB4DL54 471 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 B4GALT3O60512 393 aa19.03■□□□□ 0.64
NEK9-204ENST00000554258 FGFR4P22455 802 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms