RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 PRMT7Q9NVM4 692 aaPredicted RBP22.52■■□□□ 1.2
FOXA1-203ENST00000553751 PLAGL2Q9UPG8 496 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 SRPRBQ9Y5M8 271 aaKnown RBP22.52■■□□□ 1.2
FOXA1-203ENST00000553751 CNTNAP2Q9UHC6 1331 aa22.52■■□□□ 1.2
FOXA1-203ENST00000553751 SSBP05455 408 aaKnown RBP eCLIP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 PLA2G4BP0C869 781 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 ZSCAN22P10073 491 aaPredicted RBP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 LAG3P18627 525 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 GUCY2CP25092 1073 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 NASPP49321 788 aaPredicted RBP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 NCBP1Q09161 790 aaKnown RBP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 PKP1Q13835 747 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 SLC39A14Q15043 492 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 KARSQ15046 597 aaKnown RBP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 AGMOQ6ZNB7 445 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 SMG8Q8ND04 991 aaKnown RBP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 DEPTORQ8TB45 409 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 RSPH1Q8WYR4 309 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 PGBD4Q96DM1 585 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 MRPL9Q9BYD2 267 aaKnown RBP22.51■■□□□ 1.19
FOXA1-203ENST00000553751 LMAN2LQ9H0V9 348 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 AAASQ9NRG9 546 aa22.51■■□□□ 1.19
FOXA1-203ENST00000553751 A0A1B0GUA9 196 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 TTLL13PA6NNM8 815 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 EDN1P05305 212 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 PLCG1P19174 1290 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 NCLP19338 710 aaKnown RBP22.5■■□□□ 1.19
FOXA1-203ENST00000553751 CAMK1Q14012 370 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 TIGD5Q53EQ6 642 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 SPECC1Q5M775 1068 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 FOXD4L5Q5VV16 416 aaPredicted RBP22.5■■□□□ 1.19
FOXA1-203ENST00000553751 GLB1LQ6UWU2 654 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 USP49Q70CQ1 688 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 FOXD4L4Q8WXT5 416 aaPredicted RBP22.5■■□□□ 1.19
FOXA1-203ENST00000553751 EPSTI1Q96J88 318 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 DRC1Q96MC2 740 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 CLIC6Q96NY7 704 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 TIPINQ9BVW5 301 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 CCSER1Q9C0I3 900 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 BLOC1S4Q9NUP1 217 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 KCND2Q9NZV8 630 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 IPPQ9Y573 584 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 PCDHB12Q9Y5F1 795 aa22.5■■□□□ 1.19
FOXA1-203ENST00000553751 PLXNA4Q9HCM2 1894 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 OFD1O75665 1012 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 F13A1P00488 732 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 PRKCBP05771 671 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 DNAJB1P25685 340 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 NPTX2P47972 431 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 MAPK6Q16659 721 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 SLC27A1Q6PCB7 646 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 CDR2LQ86X02 465 aaPredicted RBP22.49■■□□□ 1.19
FOXA1-203ENST00000553751 CNNM3Q8NE01 707 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 SPPL3Q8TCT6 385 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 THEGQ9P2T0 379 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 MYO7AQ13402 2215 aa22.49■■□□□ 1.19
FOXA1-203ENST00000553751 BRWD1Q9NSI6 2320 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 ACKR2O00590 384 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 PBX3P40426 434 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 EFNA5P52803 228 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 PEX3P56589 373 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 RAD51AP2Q09MP3 1159 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 SKIV2LQ15477 1246 aaKnown RBP22.48■■□□□ 1.19
FOXA1-203ENST00000553751 CSPP1Q1MSJ5 1256 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 NOMO2Q5JPE7 1267 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 LINC00301Q8NCQ3 95 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 RASSF8Q8NHQ8 419 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 RAD54LQ92698 747 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 SYMPKQ92797 1274 aaKnown RBP22.48■■□□□ 1.19
FOXA1-203ENST00000553751 RSAD1Q9HA92 442 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 TBC1D13Q9NVG8 400 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 INPP5FQ9Y2H2 1132 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 HES2Q9Y543 173 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 A0A0C4DFX4 3053 aa22.48■■□□□ 1.19
FOXA1-203ENST00000553751 XIRP2A4UGR9 3374 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 FGF18O76093 207 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 NPTXRO95502 500 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 DMP1Q13316 513 aaPredicted RBP22.47■■□□□ 1.19
FOXA1-203ENST00000553751 PRPF4BQ13523 1007 aaKnown RBP22.47■■□□□ 1.19
FOXA1-203ENST00000553751 ARSHQ5FYA8 562 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 KCNT2Q6UVM3 1135 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 THNSL1Q8IYQ7 743 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 KRI1Q8N9T8 703 aaKnown RBP22.47■■□□□ 1.19
FOXA1-203ENST00000553751 POF1BQ8WVV4 589 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 ZNF396Q96N95 335 aaPredicted RBP22.47■■□□□ 1.19
FOXA1-203ENST00000553751 ZNF558Q96NG5 402 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 RNF39Q9H2S5 420 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 NXF3Q9H4D5 531 aaKnown RBP22.47■■□□□ 1.19
FOXA1-203ENST00000553751 PDZD7Q9H5P4 517 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 NSUN3Q9H649 340 aaKnown RBP22.47■■□□□ 1.19
FOXA1-203ENST00000553751 C17orf75Q9HAS0 396 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 ARHGAP28Q9P2N2 729 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 USP20Q9Y2K6 914 aa22.47■■□□□ 1.19
FOXA1-203ENST00000553751 NPHP3-ACAD11A0A0J9YXS1 232 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 CCDC169A6NNP5 214 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 CSPG5O95196 566 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 ITGA4P13612 1032 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 LIG1P18858 919 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 AFF1P51825 1210 aaKnown RBP22.46■■□□□ 1.19
FOXA1-203ENST00000553751 CACNB1Q02641 598 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms