RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZNF623O75123 536 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 PSAPP07602 524 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 HOXB3P14651 431 aaPredicted RBP15.61■□□□□ 0.09
PRPF39-204ENST00000553605 ANTXR2P58335 489 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 LPAL2Q16609 132 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 PLA2G4DQ86XP0 818 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 PALB2Q86YC2 1186 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 CCDC82Q8N4S0 544 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 CLDN23Q96B33 292 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 PGBD4Q96DM1 585 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 NELL2Q99435 816 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 HERC2P3Q9BVR0 1158 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 ANO3Q9BYT9 981 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 PRKD2Q9BZL6 878 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 IL25Q9H293 177 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 RXFP1Q9HBX9 757 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 PCDHA10Q9Y5I2 948 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 LRP3O75074 770 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 FSHRP23945 695 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 PMLP29590 882 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 GLUD2P49448 558 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 RAB27AP51159 221 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 PFKPQ01813 784 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 LAIR1Q6GTX8 287 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 ZNF746Q6NUN9 644 aaPredicted RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 SMAP1Q8IYB5 467 aaPredicted RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 CELF5Q8N6W0 485 aaKnown RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 DDX1Q92499 740 aaKnown RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 RIC8AQ9NPQ8 531 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 PRMT8Q9NR22 394 aaPredicted RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 NRBP2Q9NSY0 501 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 KANSL3Q9P2N6 904 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 PIN4Q9Y237 131 aaKnown RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 TAF6LQ9Y6J9 622 aa15.6■□□□□ 0.09
PRPF39-204ENST00000553605 MYH9P35579 1960 aaKnown RBP15.6■□□□□ 0.09
PRPF39-204ENST00000553605 FAM86B1E9PN63 330 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 C1RP00736 705 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 RETP07949 1114 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 FAM86B2P0C5J1 330 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 SFPQP23246 707 aaKnown RBP eCLIP15.59■□□□□ 0.09
PRPF39-204ENST00000553605 TARSP26639 723 aaKnown RBP15.59■□□□□ 0.09
PRPF39-204ENST00000553605 SREBF1P36956 1147 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 RPS9P46781 194 aaKnown RBP15.59■□□□□ 0.09
PRPF39-204ENST00000553605 AFF1P51825 1210 aaKnown RBP15.59■□□□□ 0.09
PRPF39-204ENST00000553605 CDC42EP1Q00587 391 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 AGMOQ6ZNB7 445 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 MTSS1LQ765P7 747 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 PLEKHM2Q8IWE5 1019 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 ZNF577Q9BSK1 485 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 OSBPL3Q9H4L5 887 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 SEMA4GQ9NTN9 838 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 TBC1D22BQ9NU19 505 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 TCEAL9Q9UHQ7 104 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 CDH7Q9ULB5 785 aa15.59■□□□□ 0.09
PRPF39-204ENST00000553605 A0A087WZ62 844 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 TGM5O43548 720 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 POMCP01189 267 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 OATP04181 439 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 RXRAP19793 462 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 NRLP54845 237 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 SHC2P98077 582 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 N4BP2L1Q5TBK1 243 aaPredicted RBP15.58■□□□□ 0.08
PRPF39-204ENST00000553605 NFXL1Q6ZNB6 911 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 PRR23CQ6ZRP0 262 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 FDXACB1Q9BRP7 624 aaPredicted RBP15.58■□□□□ 0.08
PRPF39-204ENST00000553605 INO80BQ9C086 356 aaPredicted RBP15.58■□□□□ 0.08
PRPF39-204ENST00000553605 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
PRPF39-204ENST00000553605 MARCH5Q9NX47 278 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 PRG3Q9Y2Y8 225 aaPredicted RBP15.58■□□□□ 0.08
PRPF39-204ENST00000553605 SAMM50Q9Y512 469 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 PCDHB2Q9Y5E7 798 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 ASPMQ8IZT6 3477 aa15.58■□□□□ 0.08
PRPF39-204ENST00000553605 IGLV3-22A0A075B6J6 115 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 ZNF862O60290 1169 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 GDF9O60383 454 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 NAPAP54920 295 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 DSG1Q02413 1049 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 MTAPQ13126 283 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 DRP2Q13474 957 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 HDAC1Q13547 482 aaPredicted RBP15.57■□□□□ 0.08
PRPF39-204ENST00000553605 CSRP2Q16527 193 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 WWC2Q6AWC2 1192 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 LILRA6Q6PI73 481 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 PRR23BQ6ZRT6 265 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 TPRG1Q6ZUI0 275 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 GRASPQ7Z6J2 395 aaPredicted RBP15.57■□□□□ 0.08
PRPF39-204ENST00000553605 MB21D2Q8IYB1 491 aaPredicted RBP15.57■□□□□ 0.08
PRPF39-204ENST00000553605 RNF168Q8IYW5 571 aaPredicted RBP15.57■□□□□ 0.08
PRPF39-204ENST00000553605 RSAD1Q9HA92 442 aa15.57■□□□□ 0.08
PRPF39-204ENST00000553605 CCDC69A6NI79 296 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 ZMYND10O75800 440 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 EFEMP2O95967 443 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 PROS1P07225 676 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 CALM1P0DP23 149 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 CALM2P0DP24 149 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 CALM3P0DP25 149 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 OR1G1P47890 313 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms