RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 NEK8Q86SG6 692 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 CABP7Q86V35 215 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 URGCPQ8TCY9 931 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 PSPC1Q8WXF1 523 aaKnown RBP10.49□□□□□ -0.73
CHD8-203ENST00000553283 HAS1Q92839 578 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 TMEM143Q96AN5 459 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 KLHL5Q96PQ7 755 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 TMEM175Q9BSA9 504 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 GBP3Q9H0R5 595 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 MINDY3Q9H8M7 445 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 WRAP73Q9P2S5 460 aaPredicted RBP10.49□□□□□ -0.73
CHD8-203ENST00000553283 LIMD1Q9UGP4 676 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 DBR1Q9UK59 544 aaKnown RBP10.49□□□□□ -0.73
CHD8-203ENST00000553283 USTQ9Y2C2 406 aa10.49□□□□□ -0.73
CHD8-203ENST00000553283 WDR81Q562E7 1941 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 CCNT1O60563 726 aaKnown RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 LILRB3O75022 631 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 CDKL5O76039 1030 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 DDHD2O94830 711 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 ASGR2P07307 311 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 XBP1P17861 261 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 KLRC2P26717 231 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 YWHABP31946 246 aaKnown RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 AFF1P51825 1210 aaKnown RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 SCRN1Q12765 414 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 TMC5Q6UXY8 1006 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 OTUD6AQ7L8S5 288 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 GPR149Q86SP6 731 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 TDRD5Q8NAT2 981 aaKnown RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 CNNM3Q8NE01 707 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 TCP11Q8WWU5 503 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 ATOH1Q92858 354 aaPredicted RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 FAM193BQ96PV7 902 aaPredicted RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 NAP1L4Q99733 375 aaKnown RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 EMILIN2Q9BXX0 1053 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 ZSWIM4Q9H7M6 989 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 RSAD1Q9HA92 442 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 UBN1Q9NPG3 1134 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 RGL1Q9NZL6 768 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 FAN1Q9Y2M0 1017 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 PTPRZ1P23471 2315 aaPredicted RBP10.48□□□□□ -0.73
CHD8-203ENST00000553283 CNTNAP2Q9UHC6 1331 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 MYO10Q9HD67 2058 aa10.48□□□□□ -0.73
CHD8-203ENST00000553283 NRP1O14786 923 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
CHD8-203ENST00000553283 GAS2O43903 313 aaKnown RBP10.47□□□□□ -0.73
CHD8-203ENST00000553283 ST18O60284 1047 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 MARCH6O60337 910 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 POMCP01189 267 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 SSBP05455 408 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHD8-203ENST00000553283 CNPP09543 421 aaKnown RBP10.47□□□□□ -0.73
CHD8-203ENST00000553283 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
CHD8-203ENST00000553283 CLCN4P51793 760 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 EMC2Q15006 297 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 PCBP1Q15365 356 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHD8-203ENST00000553283 XKR9Q5GH70 373 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 PIK3AP1Q6ZUJ8 805 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 FERMT3Q86UX7 667 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 RNF149Q8NC42 400 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 SMG8Q8ND04 991 aaKnown RBP10.47□□□□□ -0.73
CHD8-203ENST00000553283 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 LXNQ9BS40 222 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 SMOC2Q9H3U7 446 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 SFXN1Q9H9B4 322 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 MRPL17Q9NRX2 175 aaKnown RBP10.47□□□□□ -0.73
CHD8-203ENST00000553283 GJB4Q9NTQ9 266 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 FAM86C1Q9NVL1 165 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 STK36Q9NRP7 1315 aa10.47□□□□□ -0.73
CHD8-203ENST00000553283 H0Y858 1186 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 ZBTB39O15060 712 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 INPPL1O15357 1258 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 PFKFB2O60825 505 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 SLITRK3O94933 977 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 BAG4O95429 457 aaKnown RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 SOD2P04179 222 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 ITGA4P13612 1032 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 AXLP30530 894 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 PTENP60484 403 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 POU5F1BQ06416 359 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 SPIRE1Q08AE8 756 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 NCBP1Q09161 790 aaKnown RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 CTTNQ14247 550 aaKnown RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 NCAPH2Q6IBW4 605 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 OTOP3Q7RTS5 596 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 TPH2Q8IWU9 490 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 COLGALT2Q8IYK4 626 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 SLFN12Q8IYM2 578 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 FEZF2Q8TBJ5 459 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 ACSF2Q96CM8 615 aaPredicted RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 DYDC2Q96IM9 177 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 MTRQ99707 1265 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 RNF39Q9H2S5 420 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.73
CHD8-203ENST00000553283 TPCN1Q9ULQ1 816 aa10.46□□□□□ -0.73
CHD8-203ENST00000553283 SSX2IPQ9Y2D8 614 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms