RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 RTN4RL1Q86UN2 441 aaPredicted RBP10.16□□□□□ -0.78
CDK4-211ENST00000552254 FAM228AQ86W67 206 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
CDK4-211ENST00000552254 MCPH1Q8NEM0 835 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 FBXO22Q8NEZ5 403 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
CDK4-211ENST00000552254 ASAP3Q8TDY4 903 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 CALML4Q96GE6 196 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 EPSTI1Q96J88 318 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 CDK5RAP3Q96JB5 506 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 NLRP4Q96MN2 994 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 FDXACB1Q9BRP7 624 aaPredicted RBP10.16□□□□□ -0.78
CDK4-211ENST00000552254 GCOM2Q9BZD3 368 aaPredicted RBP10.16□□□□□ -0.78
CDK4-211ENST00000552254 TMX1Q9H3N1 280 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 IFT122Q9HBG6 1241 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 MUTYHQ9UIF7 546 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 CFAP45Q9UL16 551 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 ST3GAL5Q9UNP4 418 aa10.16□□□□□ -0.78
CDK4-211ENST00000552254 FNDC1Q4ZHG4 1894 aaPredicted RBP10.16□□□□□ -0.78
CDK4-211ENST00000552254 COL4A6Q14031 1691 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 CSDE1O75534 798 aaKnown RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 CSPG5O95196 566 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 PLCG1P19174 1290 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 FGFR4P22455 802 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 GLRA2P23416 452 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 POU5F1BQ06416 359 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 NFX1Q12986 1120 aaKnown RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 MXD4Q14582 209 aaPredicted RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 KARSQ15046 597 aaKnown RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 TIGD5Q53EQ6 642 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 RINT1Q6NUQ1 792 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 FAM43BQ6ZT52 329 aaPredicted RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 ADHFE1Q8IWW8 467 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 SYT2Q8N9I0 419 aaPredicted RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 LRRC15Q8TF66 581 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 CHAMP1Q96JM3 812 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 FTHL17Q9BXU8 183 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 POLR3FQ9H1D9 316 aaPredicted RBP10.15□□□□□ -0.78
CDK4-211ENST00000552254 GPRC5CQ9NQ84 441 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
CDK4-211ENST00000552254 MGEA5O60502 916 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 CUTAO60888 179 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 PLA2G4BP0C869 781 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 IRS1P35568 1242 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 ANP32AP39687 249 aaKnown RBP10.14□□□□□ -0.79
CDK4-211ENST00000552254 GATMP50440 423 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 SLC12A3P55017 1021 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 PTENP60484 403 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 NUCB2P80303 420 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 GPM6BQ13491 265 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 CAPSQ13938 189 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 TFDP1Q14186 410 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 DSC3Q14574 896 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
CDK4-211ENST00000552254 FAM102BQ5T8I3 360 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 C1orf186Q6ZWK4 172 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 SRGAP1Q7Z6B7 1085 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 TMEM192Q8IY95 271 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 FIBCD1Q8N539 461 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 RNF149Q8NC42 400 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 KCNG4Q8TDN1 519 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 ATOH1Q92858 354 aaPredicted RBP10.14□□□□□ -0.79
CDK4-211ENST00000552254 PBXIP1Q96AQ6 731 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 RUSC1Q9BVN2 902 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 INO80BQ9C086 356 aaPredicted RBP10.14□□□□□ -0.79
CDK4-211ENST00000552254 MINDY3Q9H8M7 445 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 POLD4Q9HCU8 107 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 BLOC1S4Q9NUP1 217 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 CLDND1Q9NY35 253 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 CCDC39Q9UFE4 941 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 ATP6V1DQ9Y5K8 247 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 DMXL1Q9Y485 3027 aa10.14□□□□□ -0.79
CDK4-211ENST00000552254 SPTBN2O15020 2390 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 SSBP05455 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDK4-211ENST00000552254 LINC00271P0C7V0 271 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 SFPQP23246 707 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDK4-211ENST00000552254 CTNNB1P35222 781 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 TXLNAP40222 546 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 PHKA2P46019 1235 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 KRT85P78386 507 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 BTG3Q14201 252 aaPredicted RBP10.13□□□□□ -0.79
CDK4-211ENST00000552254 MCM6Q14566 821 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 CLUL1Q15846 466 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 PAN2Q504Q3 1202 aaKnown RBP10.13□□□□□ -0.79
CDK4-211ENST00000552254 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
CDK4-211ENST00000552254 DAW1Q8N136 415 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 CRIPAKQ8N1N5 446 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 RASSF8Q8NHQ8 419 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
CDK4-211ENST00000552254 BSNDQ8WZ55 320 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 RAD54LQ92698 747 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 KIFAP3Q92845 792 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 PABPC5Q96DU9 382 aaKnown RBP10.13□□□□□ -0.79
CDK4-211ENST00000552254 ADAM2Q99965 735 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 NFKBIZQ9BYH8 718 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 IRF2BPLQ9H1B7 796 aa10.13□□□□□ -0.79
CDK4-211ENST00000552254 RC3H2Q9HBD1 1191 aaKnown RBP10.13□□□□□ -0.79
CDK4-211ENST00000552254 RGS18Q9NS28 235 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms