RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 LILRB3O75022 631 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 POMCP01189 267 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 P4HBP07237 508 aaKnown RBP20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 RAB27AP51159 221 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 SPIRE1Q08AE8 756 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 PPP4R3AQ6IN85 833 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 KIAA1841Q6NSI8 718 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 CPLX2Q6PUV4 134 aaKnown RBP20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 TAS1R1Q7RTX1 841 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 SMG8Q8ND04 991 aaKnown RBP20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 SLC7A3Q8WY07 619 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 KLHL5Q96PQ7 755 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 LXNQ9BS40 222 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 SORCS3Q9UPU3 1222 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 DENND4AQ7Z401 1863 aa20.01■□□□□ 0.79
PRPF40B-215ENST00000551418 H0Y858 1186 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 CNPP09543 421 aaKnown RBP20■□□□□ 0.79
PRPF40B-215ENST00000551418 MYBP10242 640 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 CYP4A11Q02928 519 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 BMS1Q14692 1282 aaKnown RBP20■□□□□ 0.79
PRPF40B-215ENST00000551418 EPHA7Q15375 998 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 ATAT1Q5SQI0 421 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 NCAPH2Q6IBW4 605 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 C4orf19Q8IY42 314 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 PSPC1Q8WXF1 523 aaKnown RBP20■□□□□ 0.79
PRPF40B-215ENST00000551418 PGBD4Q96DM1 585 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 JPH2Q9BR39 696 aaPredicted RBP20■□□□□ 0.79
PRPF40B-215ENST00000551418 EIF2AQ9BY44 585 aaKnown RBP20■□□□□ 0.79
PRPF40B-215ENST00000551418 RSAD1Q9HA92 442 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 XPNPEP1Q9NQW7 623 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 DZANK1Q9NVP4 752 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 MIOSQ9NXC5 875 aa20■□□□□ 0.79
PRPF40B-215ENST00000551418 DBR1Q9UK59 544 aaKnown RBP20■□□□□ 0.79
PRPF40B-215ENST00000551418 USP34Q70CQ2 3546 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 A0A087WWV3 80 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 F8W810 466 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 NRP1O14786 923 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 EPB41L2O43491 1005 aaKnown RBP19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 YWHABP31946 246 aaKnown RBP19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 NR5A1Q13285 461 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 MTMR3Q13615 1198 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 EMC2Q15006 297 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 XKR9Q5GH70 373 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 FERMT3Q86UX7 667 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 CABP7Q86V35 215 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 FAM177A1Q8N128 213 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 TMEM105Q8N8V8 129 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 RNF149Q8NC42 400 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 CPB2Q96IY4 423 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 PRRX2Q99811 253 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 HES2Q9Y543 173 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 PLXNA3P51805 1871 aa19.99■□□□□ 0.79
PRPF40B-215ENST00000551418 ZFHX2Q9C0A1 2572 aaPredicted RBP19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 WNT7AO00755 349 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 C2CD2LO14523 706 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 PFKFB2O60825 505 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 SLITRK3O94933 977 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 ALDH2P05091 517 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 FDPSP14324 419 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 GCFC2P16383 781 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 KLRC2P26717 231 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 RFC5P40937 340 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 CLCN4P51793 760 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 ZDHHC14Q8IZN3 488 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 TDRD5Q8NAT2 981 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 MARCH5Q9NX47 278 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 FAN1Q9Y2M0 1017 aa19.98■□□□□ 0.79
PRPF40B-215ENST00000551418 NCLP19338 710 aaKnown RBP19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 GIT2Q14161 759 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 GPR149Q86SP6 731 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 TPH2Q8IWU9 490 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 UBALD2Q8IYN6 164 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 RSPH1Q8WYR4 309 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 ATOH1Q92858 354 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 GAD1Q99259 594 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 PRG3Q9Y2Y8 225 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 IPPQ9Y573 584 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 STK36Q9NRP7 1315 aa19.97■□□□□ 0.79
PRPF40B-215ENST00000551418 TBX3O15119 743 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 MARCH6O60337 910 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 TSPAN1O60635 241 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 DKC1O60832 514 aaKnown RBP eCLIP19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 COLGALT2Q8IYK4 626 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 NECAB1Q8N987 351 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 ASAP3Q8TDY4 903 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 TNFRSF25Q93038 417 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 FAM193BQ96PV7 902 aaPredicted RBP19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 TMEM175Q9BSA9 504 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 ZSWIM4Q9H7M6 989 aa19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 ORC3Q9UBD5 711 aaPredicted RBP19.96■□□□□ 0.79
PRPF40B-215ENST00000551418 CDKL5O76039 1030 aa19.95■□□□□ 0.78
PRPF40B-215ENST00000551418 LARGE1O95461 756 aa19.95■□□□□ 0.78
PRPF40B-215ENST00000551418 EFEMP2O95967 443 aa19.95■□□□□ 0.78
PRPF40B-215ENST00000551418 ITGA4P13612 1032 aa19.95■□□□□ 0.78
PRPF40B-215ENST00000551418 PTENP60484 403 aa19.95■□□□□ 0.78
PRPF40B-215ENST00000551418 AMHR2Q16671 573 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms