RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 LOC730098B7Z3J9 87 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 JAK2O60674 1132 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 GCFC2P16383 781 aaKnown RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 PPM1AP35813 382 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 KRT2P35908 639 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 CDC42EP1Q00587 391 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 ME3Q16798 604 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 XKR9Q5GH70 373 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 HERC4Q5GLZ8 1057 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 PPP4R3AQ6IN85 833 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 ANKRD54Q6NXT1 300 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 ZNF410Q86VK4 478 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 TMEM173Q86WV6 379 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 TPH2Q8IWU9 490 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 SLC7A3Q8WY07 619 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 CDCA3Q99618 268 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 LXNQ9BS40 222 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 PHF7Q9BWX1 381 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 INO80BQ9C086 356 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 S1PR5Q9H228 398 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 NRDE2Q9H7Z3 1164 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 MINDY3Q9H8M7 445 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 IFT122Q9HBG6 1241 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 NGRNQ9NPE2 291 aaKnown RBP10.12□□□□□ -0.79
LETMD1-228ENST00000550929 CHST12Q9NRB3 414 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 FAM105AQ9NUU6 356 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 PPP4R2Q9NY27 417 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 DNAJB4Q9UDY4 337 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 COL4A3BPQ9Y5P4 624 aa10.12□□□□□ -0.79
LETMD1-228ENST00000550929 C5orf42Q9H799 3197 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 WNT7AO00755 349 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 B4GALT3O60512 393 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 DKC1O60832 514 aaKnown RBP eCLIP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 CLASP2O75122 1294 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 OFD1O75665 1012 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 BAG4O95429 457 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 WEE2P0C1S8 567 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 ATP2B1P20020 1258 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 YWHABP31946 246 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 AFF1P51825 1210 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 GUCY1B3Q02153 619 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 RNASELQ05823 741 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 LAMTOR4Q0VGL1 99 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 KCNC3Q14003 757 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 SMC1AQ14683 1233 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 ANKRD1Q15327 319 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 NOMO2Q5JPE7 1267 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 GLB1LQ6UWU2 654 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 AGMOQ6ZNB7 445 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 ZNF280BQ86YH2 543 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 FAM177A1Q8N128 213 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 VPS52Q8N1B4 723 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 C12orf76Q8N812 135 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 MRPL43Q8N983 215 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 BCL7CQ8WUZ0 217 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 PSPC1Q8WXF1 523 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 EDAQ92838 391 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 TMEM169Q96HH4 297 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 JPH2Q9BR39 696 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
LETMD1-228ENST00000550929 TBC1D13Q9NVG8 400 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 PCDHB2Q9Y5E7 798 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 HCFC2Q9Y5Z7 792 aa10.11□□□□□ -0.79
LETMD1-228ENST00000550929 C2orf71A6NGG8 1288 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 BTBD18B2RXH4 712 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 TBX3O15119 743 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 DDHD2O94830 711 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 SLITRK3O94933 977 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 SSBP05455 408 aaKnown RBP eCLIP10.1□□□□□ -0.79
LETMD1-228ENST00000550929 GALTP07902 379 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 SRGAP2BP0DMP2 458 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 TXKP42681 527 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 SLC11A1P49279 550 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 NEK4P51957 841 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 SPIRE1Q08AE8 756 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 CBX2Q14781 532 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-228ENST00000550929 EMC2Q15006 297 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 OTUD6AQ7L8S5 288 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 C4orf19Q8IY42 314 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 TMEM87AQ8NBN3 555 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 RNF149Q8NC42 400 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 NSUN7Q8NE18 718 aaKnown RBP10.1□□□□□ -0.79
LETMD1-228ENST00000550929 FEZF2Q8TBJ5 459 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 SUSD6Q92537 303 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 WASF1Q92558 559 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 TNFRSF25Q93038 417 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 NAP1L4Q99733 375 aaKnown RBP10.1□□□□□ -0.79
LETMD1-228ENST00000550929 EIF2AK1Q9BQI3 630 aaKnown RBP10.1□□□□□ -0.79
LETMD1-228ENST00000550929 MRPL9Q9BYD2 267 aaKnown RBP10.1□□□□□ -0.79
LETMD1-228ENST00000550929 ZSWIM4Q9H7M6 989 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 BRMS1Q9HCU9 246 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 AGPAT5Q9NUQ2 364 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 NCOR1O75376 2440 aa10.1□□□□□ -0.79
LETMD1-228ENST00000550929 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-228ENST00000550929 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
LETMD1-228ENST00000550929 M0R296 226 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms