RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CPB2Q96IY4 423 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 PRIMPOLQ96LW4 560 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 TRIM9Q9C026 710 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 CCDC113Q9H0I3 377 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 TMEM134Q9H6X4 195 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 ARHGAP28Q9P2N2 729 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 LRFN2Q9ULH4 789 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 H0YCG3 227 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 ACKR2O00590 384 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 TLL1O43897 1013 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 ZNF202O95125 648 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 GJB5O95377 273 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 GAP43P17677 238 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 ARF4P18085 180 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 ASIC1P78348 528 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 FAM189BP81408 668 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 PRPF4BQ13523 1007 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 HAUS6Q7Z4H7 955 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 SFR1Q86XK3 245 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 NPAS4Q8IUM7 802 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 CCDC65Q8IXS2 484 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 SLC17A8Q8NDX2 589 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 C7orf25Q9BPX7 421 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 BLZF1Q9H2G9 400 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 PANK4Q9NVE7 773 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 MSRAQ9UJ68 235 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 USP20Q9Y2K6 914 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 PCDHB7Q9Y5E2 793 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 PHLPP2Q6ZVD8 1323 aa17.87■□□□□ 0.45
CHMP1A-209ENST00000550872 A0A0U1RQF3 1178 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 K7ENM7 598 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 GADD45BO75293 160 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 PBX2P40425 430 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 NCKAP1LP55160 1127 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 RAB30Q15771 203 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 HERC4Q5GLZ8 1057 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 NOTUMQ6P988 496 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 KRBA2Q6ZNG9 492 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 ECHDC2Q86YB7 292 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 FAM178BQ8IXR5 827 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 GRAMD1CQ8IYS0 662 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 DEFB123Q8N688 67 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 TMEM87AQ8NBN3 555 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 RNF169Q8NCN4 708 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 TMEM161BQ8NDZ6 487 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 CCDC51Q96ER9 411 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 PAGE5Q96GU1 130 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 PBX4Q9BYU1 374 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 SEL1LQ9UBV2 794 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 PCDHA11Q9Y5I1 949 aa17.86■□□□□ 0.45
CHMP1A-209ENST00000550872 TTLL13PA6NNM8 815 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 MAPTP10636 758 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 SKIP12755 728 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 MYOGP15173 224 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 CASP1P29466 404 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 NMT1P30419 496 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 RAB27AP51159 221 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 STRN3Q13033 797 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 PTPRSQ13332 1948 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 CNNM4Q6P4Q7 775 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 TAS1R3Q7RTX0 852 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 CDR2LQ86X02 465 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 YME1L1Q96TA2 773 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 RAD9AQ99638 391 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 TRAIPQ9BWF2 469 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 ELAC1Q9H777 363 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 FAM105AQ9NUU6 356 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 TMEM161AQ9NX61 479 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 TBC1D7Q9P0N9 293 aa17.85■□□□□ 0.45
CHMP1A-209ENST00000550872 CNTNAP2Q9UHC6 1331 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 A0A1B0GUA9 196 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 N4BP3O15049 544 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 EDN1P05305 212 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 DNAJB2P25686 324 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 FAM160A1Q05DH4 1040 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 CUL4BQ13620 913 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 UBXN11Q5T124 520 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 NT5DC1Q5TFE4 455 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 CLEC17AQ6ZS10 378 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 FMR1NBQ8N0W7 255 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 CRIPAKQ8N1N5 446 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 CCDC34Q96HJ3 373 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 FIZ1Q96SL8 496 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 EIF2AQ9BY44 585 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 MRPL4Q9BYD3 311 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 NKX2-4Q9H2Z4 354 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 MRPL44Q9H9J2 332 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 STXBP5LQ9Y2K9 1186 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 YBX2Q9Y2T7 364 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 INSL6Q9Y581 213 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 PCDHB2Q9Y5E7 798 aa17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 LAMA2P24043 3122 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-209ENST00000550872 GTPBP6O43824 516 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 ZNF623O75123 536 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 DGKIO75912 1065 aa17.83■□□□□ 0.44
CHMP1A-209ENST00000550872 NPTXRO95502 500 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms